RNA–Protein interactions for RNA: ENST00000587956.5

RANBP3-213, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-213	ENST00000587956	LOC101059948	A0A1B0GTJ6	334 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	STK17B	O94768	372 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	ZIC2	O95409	532 aa	Predicted RBP	13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	FAM87A	P0C7U9	286 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	ITGAL	P20701	1170 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	MC4R	P32245	332 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	CAPZB	P47756	277 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	ZNF140	P52738	457 aa	Predicted RBP	13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	MSLN	Q13421	630 aa	Predicted RBP	13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	GSE1	Q14687	1217 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	TBR1	Q16650	682 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	PARP6	Q2NL67	630 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	SEL1L2	Q5TEA6	688 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	TAS2R42	Q7RTR8	314 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	TIPARP	Q7Z3E1	657 aa	Known RBP	13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	RASGRP3	Q8IV61	690 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	CFAP206	Q8IYR0	622 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	NLGN4X	Q8N0W4	816 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	LILRA3	Q8N6C8	439 aa	Predicted RBP	13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	MED8	Q96G25	268 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	WBP1	Q96G27	269 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	TEFM	Q96QE5	360 aa	Known RBP	13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	OR6C1	Q96RD1	312 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	INSM2	Q96T92	566 aa	Predicted RBP	13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	FBXO8	Q9NRD0	319 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	SMOX	Q9NWM0	555 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	PILRA	Q9UKJ1	303 aa		13.76	□□□□□ -0.21
RANBP3-213	ENST00000587956	MGAT4D	A6NG13	374 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	PYCARD-AS1	I3L0S3	204 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	LDB2	O43679	373 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	KCNJ13	O60928	360 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	PRKAR1A	P10644	381 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	RALB	P11234	206 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	MTHFD1	P11586	935 aa	Known RBP	13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	ZNF28	P17035	718 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	ARCN1	P48444	511 aa	Known RBP	13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	PDE1B	Q01064	536 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	DMPK	Q09013	629 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	KLF1	Q13351	362 aa	Predicted RBP	13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	SNX1	Q13596	522 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	KRT33B	Q14525	404 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	METRNL	Q641Q3	311 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	SNX20	Q7Z614	316 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	PRUNE1	Q86TP1	453 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	RBM12B	Q8IXT5	1001 aa	Known RBP	13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	NXPE1	Q8N323	547 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	ULK4	Q96C45	1275 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	ZDHHC12	Q96GR4	267 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	HES6	Q96HZ4	224 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	PPP1R2P1	Q96PQ5	205 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	ULBP3	Q9BZM4	244 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	ZNF768	Q9H5H4	540 aa	Known RBP	13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	LRRC40	Q9H9A6	602 aa		13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	SIDT1	Q9NXL6	827 aa	Known RBP	13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	SMG1	Q96Q15	3661 aa	Known RBP	13.75	□□□□□ -0.21
RANBP3-213	ENST00000587956	COL6A6	A6NMZ7	2263 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	ATM	Q13315	3056 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	SGTA	O43765	313 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	IFNB1	P01574	187 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	ANKRD34C	P0C6C1	535 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	SLC35G4	P0C7Q5	338 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	PLA2G2A	P14555	144 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	HADHA	P40939	763 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	LMAN1	P49257	510 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	NFKB2	Q00653	900 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	NFATC3	Q12968	1075 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	KCNAB1	Q14722	419 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	CCDC38	Q502W7	563 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	KCTD11	Q693B1	232 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	CERS6	Q6ZMG9	384 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	SERPINA9	Q86WD7	417 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	OR52K1	Q8NGK4	314 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	OR2L2	Q8NH16	312 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	SLC35B2	Q8TB61	432 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	C1orf54	Q8WWF1	131 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	ZNF514	Q96K75	400 aa	Predicted RBP	13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	RMDN2	Q96LZ7	410 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	COPS8	Q99627	209 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	MAP3K3	Q99759	626 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	SLC12A9	Q9BXP2	914 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	ARNT2	Q9HBZ2	717 aa		13.74	□□□□□ -0.21
RANBP3-213	ENST00000587956	IGHV5-51	A0A0C4DH38	117 aa		13.73	□□□□□ -0.21
RANBP3-213	ENST00000587956	OR6C74	A6NCV1	312 aa		13.73	□□□□□ -0.21
RANBP3-213	ENST00000587956	OR51F1	A6NGY5	319 aa		13.73	□□□□□ -0.21
RANBP3-213	ENST00000587956	CFAP99	D6REC4	459 aa		13.73	□□□□□ -0.21
RANBP3-213	ENST00000587956	NKX2-8	O15522	239 aa		13.73	□□□□□ -0.21
RANBP3-213	ENST00000587956	KRT86	O43790	486 aa		13.73	□□□□□ -0.21
RANBP3-213	ENST00000587956	KIAA0754	O94854	1291 aa		13.73	□□□□□ -0.21
RANBP3-213	ENST00000587956	ATP1B2	P14415	290 aa	Predicted RBP	13.73	□□□□□ -0.21
RANBP3-213	ENST00000587956	ETS1	P14921	441 aa		13.73	□□□□□ -0.21
RANBP3-213	ENST00000587956	MAP4	P27816	1152 aa	Known RBP	13.73	□□□□□ -0.21
RANBP3-213	ENST00000587956	ARL4D	P49703	201 aa		13.73	□□□□□ -0.21
RANBP3-213	ENST00000587956	P3H1	Q32P28	736 aa		13.73	□□□□□ -0.21
RANBP3-213	ENST00000587956	BCL7A	Q4VC05	210 aa		13.73	□□□□□ -0.21
RANBP3-213	ENST00000587956	C16orf46	Q6P387	395 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms