RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 TAF1AQ15573 450 aaPredicted RBP18.38■□□□□ 0.53
TRIM47-205ENST00000587774 ANKRD20A2Q5SQ80 823 aa18.38■□□□□ 0.53
TRIM47-205ENST00000587774 ATP1A1-AS1Q5TC04 95 aa18.38■□□□□ 0.53
TRIM47-205ENST00000587774 ANKRD20A1Q5TYW2 823 aa18.38■□□□□ 0.53
TRIM47-205ENST00000587774 ANKRD20A3Q5VUR7 823 aa18.38■□□□□ 0.53
TRIM47-205ENST00000587774 DUS1LQ6P1R4 473 aaKnown RBP18.38■□□□□ 0.53
TRIM47-205ENST00000587774 RANBP10Q6VN20 620 aa18.38■□□□□ 0.53
TRIM47-205ENST00000587774 ATG14Q6ZNE5 492 aa18.38■□□□□ 0.53
TRIM47-205ENST00000587774 RASGRP3Q8IV61 690 aa18.38■□□□□ 0.53
TRIM47-205ENST00000587774 CDKL3Q8IVW4 592 aaPredicted RBP18.38■□□□□ 0.53
TRIM47-205ENST00000587774 GALNT6Q8NCL4 622 aa18.38■□□□□ 0.53
TRIM47-205ENST00000587774 OR4K2Q8NGD2 314 aa18.38■□□□□ 0.53
TRIM47-205ENST00000587774 ZNF398Q8TD17 642 aa18.38■□□□□ 0.53
TRIM47-205ENST00000587774 KLHL6Q8WZ60 621 aa18.38■□□□□ 0.53
TRIM47-205ENST00000587774 IMP3Q9NV31 184 aaKnown RBP18.38■□□□□ 0.53
TRIM47-205ENST00000587774 FKBPLQ9UIM3 349 aa18.38■□□□□ 0.53
TRIM47-205ENST00000587774 EFR3BQ9Y2G0 817 aa18.38■□□□□ 0.53
TRIM47-205ENST00000587774 REXO2Q9Y3B8 237 aaKnown RBP18.38■□□□□ 0.53
TRIM47-205ENST00000587774 CFAP20Q9Y6A4 193 aaKnown RBP18.38■□□□□ 0.53
TRIM47-205ENST00000587774 EPN1Q9Y6I3 576 aaPredicted RBP18.38■□□□□ 0.53
TRIM47-205ENST00000587774 DUSP10Q9Y6W6 482 aa18.38■□□□□ 0.53
TRIM47-205ENST00000587774 SEC16AO15027 2179 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 IGHV5-51A0A0C4DH38 117 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 KCNN4O15554 427 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 SRP72O76094 671 aaKnown RBP18.37■□□□□ 0.53
TRIM47-205ENST00000587774 KIAA0754O94854 1291 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 RBP3P10745 1247 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 MTHFD1P11586 935 aaKnown RBP18.37■□□□□ 0.53
TRIM47-205ENST00000587774 FGF5P12034 268 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 NELFEP18615 380 aaKnown RBP18.37■□□□□ 0.53
TRIM47-205ENST00000587774 PTPN7P35236 360 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 DLSTP36957 453 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 EIF3EP60228 445 aaKnown RBP18.37■□□□□ 0.53
TRIM47-205ENST00000587774 PLCL1Q15111 1095 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 LONRF2Q1L5Z9 754 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 METRNLQ641Q3 311 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 AADACL2Q6P093 401 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 STAMBPL1Q96FJ0 436 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 ZNF514Q96K75 400 aaPredicted RBP18.37■□□□□ 0.53
TRIM47-205ENST00000587774 PANX2Q96RD6 677 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 FERMT1Q9BQL6 677 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 ASB8Q9H765 288 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 FAM8A1Q9UBU6 413 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 TUBD1Q9UJT1 453 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 KCTD3Q9Y597 815 aa18.37■□□□□ 0.53
TRIM47-205ENST00000587774 DNMT3AQ9Y6K1 912 aaPredicted RBP18.37■□□□□ 0.53
TRIM47-205ENST00000587774 PRRC2CQ9Y520 2896 aaKnown RBP18.37■□□□□ 0.53
TRIM47-205ENST00000587774 GOLGA6L3A6NEY3 463 aa18.36■□□□□ 0.53
TRIM47-205ENST00000587774 C2orf81A6NN90 581 aa18.36■□□□□ 0.53
TRIM47-205ENST00000587774 CTNNA2P26232 953 aa18.36■□□□□ 0.53
TRIM47-205ENST00000587774 KCNC4Q03721 635 aa18.36■□□□□ 0.53
TRIM47-205ENST00000587774 C16orf46Q6P387 395 aa18.36■□□□□ 0.53
TRIM47-205ENST00000587774 C6orf15Q6UXA7 325 aaPredicted RBP18.36■□□□□ 0.53
TRIM47-205ENST00000587774 OR13C4Q8NGS5 318 aa18.36■□□□□ 0.53
TRIM47-205ENST00000587774 CCDC110Q8TBZ0 833 aa18.36■□□□□ 0.53
TRIM47-205ENST00000587774 ALG3Q92685 438 aa18.36■□□□□ 0.53
TRIM47-205ENST00000587774 SPATA13Q96N96 652 aa18.36■□□□□ 0.53
TRIM47-205ENST00000587774 WWP1Q9H0M0 922 aa18.36■□□□□ 0.53
TRIM47-205ENST00000587774 LNPEPQ9UIQ6 1025 aa18.36■□□□□ 0.53
TRIM47-205ENST00000587774 CROTQ9UKG9 612 aa18.36■□□□□ 0.53
TRIM47-205ENST00000587774 AAR2Q9Y312 384 aaKnown RBP18.36■□□□□ 0.53
TRIM47-205ENST00000587774 ANKRD12Q6UB98 2062 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 CCDC66A2RUB6 948 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 C5orf60A6NFR6 353 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 MGAT4DA6NG13 374 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 SGTAO43765 313 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 IPO7O95373 1038 aaKnown RBP18.35■□□□□ 0.53
TRIM47-205ENST00000587774 TIAF1O95411 115 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 TCN2P20062 427 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 CSRP3P50461 194 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 ZNF75DP51815 510 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 ZNF140P52738 457 aaPredicted RBP18.35■□□□□ 0.53
TRIM47-205ENST00000587774 NAP1L1P55209 391 aaKnown RBP18.35■□□□□ 0.53
TRIM47-205ENST00000587774 RWDD2BP57060 319 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 XIAPP98170 497 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 MC1RQ01726 317 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 MSLNQ13421 630 aaPredicted RBP18.35■□□□□ 0.53
TRIM47-205ENST00000587774 TUBB3Q13509 450 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 PRPSAP1Q14558 356 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 KCNAB1Q14722 419 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 DEFB109BQ30KR1 87 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 CRTC2Q53ET0 693 aaPredicted RBP18.35■□□□□ 0.53
TRIM47-205ENST00000587774 KLHL35Q6PF15 583 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 DARS2Q6PI48 645 aaKnown RBP18.35■□□□□ 0.53
TRIM47-205ENST00000587774 RAD9BQ6WBX8 426 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 PPP1R3BQ86XI6 285 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 PTRH1Q86Y79 214 aaKnown RBP18.35■□□□□ 0.53
TRIM47-205ENST00000587774 ACRBPQ8NEB7 543 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 SPDYE1Q8NFV5 336 aaPredicted RBP18.35■□□□□ 0.53
TRIM47-205ENST00000587774 OR2L2Q8NH16 312 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 UBXN4Q92575 508 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 SLC41A2Q96JW4 573 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 CALR3Q96L12 384 aaKnown RBP18.35■□□□□ 0.53
TRIM47-205ENST00000587774 C12orf66Q96MD2 445 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 INSM2Q96T92 566 aaPredicted RBP18.35■□□□□ 0.53
TRIM47-205ENST00000587774 LACRTQ9GZZ8 138 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 SEMA5BQ9P283 1151 aa18.35■□□□□ 0.53
TRIM47-205ENST00000587774 GRID2IPA4D2P6 1211 aa18.34■□□□□ 0.53
TRIM47-205ENST00000587774 OR5K3A6NET4 321 aa18.34■□□□□ 0.53
TRIM47-205ENST00000587774 AGAP14A8MT82 685 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms