RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 TUBB2BQ9BVA1 445 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 UGT1A7Q9HAW7 530 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 UGT1A10Q9HAW8 530 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 UGT1A8Q9HAW9 530 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 ACSS2Q9NR19 701 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 HRASLS2Q9NWW9 162 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 IL17CQ9P0M4 197 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 FAM153AQ9UHL3 310 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 PSMD13Q9UNM6 376 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 FARSAQ9Y285 508 aaKnown RBP13.74□□□□□ -0.21
DNMT1-213ENST00000587604 MYO9AB2RTY4 2548 aa13.74□□□□□ -0.21
DNMT1-213ENST00000587604 CPNE3O75131 537 aaKnown RBP13.73□□□□□ -0.21
DNMT1-213ENST00000587604 SCRG1O75711 98 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 AGFG2O95081 481 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 MTHFD1P11586 935 aaKnown RBP13.73□□□□□ -0.21
DNMT1-213ENST00000587604 LPOP22079 712 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-213ENST00000587604 GNLYP22749 145 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 CD68P34810 354 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-213ENST00000587604 NR2C2P49116 596 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 CCL11P51671 97 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 WNT3AP56704 352 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 RPS18P62269 152 aaKnown RBP13.73□□□□□ -0.21
DNMT1-213ENST00000587604 NFE2L1Q14494 772 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 PRKD1Q15139 912 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-213ENST00000587604 PPP2R5EQ16537 467 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 ASTE1Q2TB18 679 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-213ENST00000587604 ODF2Q5BJF6 829 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 SIRPB2Q5JXA9 342 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 LRRC38Q5VT99 294 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 IZUMO3Q5VZ72 239 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 PAPD7Q5XG87 772 aaKnown RBP13.73□□□□□ -0.21
DNMT1-213ENST00000587604 KDELC1Q6UW63 502 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 FAM151BQ6UXP7 276 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 CARFQ8N187 725 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 BEND7Q8N7W2 519 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-213ENST00000587604 DDHD1Q8NEL9 900 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 RNF25Q96BH1 459 aaPredicted RBP13.73□□□□□ -0.21
DNMT1-213ENST00000587604 ING2Q9H160 280 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 KCND1Q9NSA2 647 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 HACD3Q9P035 362 aa13.73□□□□□ -0.21
DNMT1-213ENST00000587604 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.73□□□□□ -0.212e-9■□□□□ 10.4
DNMT1-213ENST00000587604 ITPR2Q14571 2701 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 GLYATL1P3A0A0U1RQE8 302 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 ARGFXA6NJG6 315 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 OR2AG2A6NM03 316 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 ZBTB11O95625 1053 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-213ENST00000587604 KRT1P04264 644 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 KLK3P07288 261 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-213ENST00000587604 CA5AP35218 305 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 TNNT3P45378 269 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-213ENST00000587604 DYNLT1P63172 113 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 WASHC5Q12768 1159 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 XRCC4Q13426 336 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 IL10RAQ13651 578 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 ITGA9Q13797 1035 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 NOMO1Q15155 1222 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 NADK2Q4G0N4 442 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 GPRC6AQ5T6X5 926 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 CPZQ66K79 652 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 OOSP2Q86WS3 158 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 TMEM126BQ8IUX1 230 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 SLC25A41Q8N5S1 370 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 TFB1MQ8WVM0 346 aaKnown RBP13.72□□□□□ -0.21
DNMT1-213ENST00000587604 MR1Q95460 341 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 ZNF501Q96CX3 271 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-213ENST00000587604 LRFN5Q96NI6 719 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 INSM2Q96T92 566 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-213ENST00000587604 DEF6Q9H4E7 631 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 IMP3Q9NV31 184 aaKnown RBP13.72□□□□□ -0.21
DNMT1-213ENST00000587604 DDX56Q9NY93 547 aaKnown RBP13.72□□□□□ -0.21
DNMT1-213ENST00000587604 PLEKHB1Q9UF11 243 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-213ENST00000587604 ACSL5Q9ULC5 683 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 PKP3Q9Y446 797 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 MAP4K5Q9Y4K4 846 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 PCDHGB7Q9Y5F8 929 aa13.72□□□□□ -0.21
DNMT1-213ENST00000587604 CFAP20Q9Y6A4 193 aaKnown RBP13.72□□□□□ -0.21
DNMT1-213ENST00000587604 SSU72P8A0A1W2PR75 194 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 KLHL33A6NCF5 533 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 MGAT4DA6NG13 374 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 GPR39O43194 453 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 SORBS2O94875 1100 aaKnown RBP13.71□□□□□ -0.21
DNMT1-213ENST00000587604 NFKB1P19838 968 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 CHRNA4P43681 627 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 GSDMDP57764 484 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 CHAF1BQ13112 559 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 GPS2Q13227 327 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 SLC1A5Q15758 541 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 GPR19Q15760 415 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 LONRF2Q1L5Z9 754 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 TMTC4Q5T4D3 741 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 ARMC6Q6NXE6 501 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 GLT6D1Q7Z4J2 308 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 RHOT2Q8IXI1 618 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 RHOT1Q8IXI2 618 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 SLC38A9Q8NBW4 561 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 OR8K1Q8NGG5 319 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 BLOC1S5Q8TDH9 187 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 ADAMTS17Q8TE56 1095 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 MRGPRX2Q96LB1 330 aa13.71□□□□□ -0.21
DNMT1-213ENST00000587604 FCRL5Q96RD9 977 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms