RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 NAGLUP54802 743 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 HNRNPH2P55795 449 aaKnown RBP10.03□□□□□ -0.8
APOC1-201ENST00000586638 DMWDQ09019 674 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 ASPHQ12797 758 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 LRRC32Q14392 662 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 SPRED3Q2MJR0 410 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 AGBL4Q5VU57 503 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 FAM46CQ5VWP2 391 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 UGT3A1Q6NUS8 523 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 C6orf89Q6UWU4 347 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 PRR23CQ6ZRP0 262 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 CEP68Q76N32 757 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 MAVSQ7Z434 540 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 TRIM74Q86UV6 250 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 LONP2Q86WA8 852 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 RALGPS2Q86X27 583 aaPredicted RBP10.03□□□□□ -0.8
APOC1-201ENST00000586638 ZBTB2Q8N680 514 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 ZNF781Q8N8C0 355 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 IL17RCQ8NAC3 791 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 DDHD1Q8NEL9 900 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 OR2T3Q8NH03 318 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 PPP4R1Q8TF05 950 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 EEF1AKMT1Q8WVE0 214 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 KIAA1191Q96A73 305 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 PHF21BQ96EK2 531 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 ZSCAN5AQ9BUG6 496 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 TRPM6Q9BX84 2022 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 HDAC8Q9BY41 377 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 SHCBP1LQ9BZQ2 653 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 TFB2MQ9H5Q4 396 aaKnown RBP10.03□□□□□ -0.8
APOC1-201ENST00000586638 PNPOQ9NVS9 261 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 MBD1Q9UIS9 605 aaPredicted RBP10.03□□□□□ -0.8
APOC1-201ENST00000586638 RNF112Q9ULX5 631 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 DHRS7Q9Y394 339 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 FADS3Q9Y5Q0 445 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 USH1CQ9Y6N9 552 aa10.03□□□□□ -0.8
APOC1-201ENST00000586638 RGSL1A5PLK6 1076 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 LRRC14BA6NHZ5 514 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 NPC1O15118 1278 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 GDF9O60383 454 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 RNASEH1O60930 286 aaKnown RBP10.02□□□□□ -0.81
APOC1-201ENST00000586638 ADAM23O75077 832 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 RECQL5O94762 991 aaPredicted RBP10.02□□□□□ -0.81
APOC1-201ENST00000586638 TGDSO95455 350 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 ADH1BP00325 375 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 SOD1P00441 154 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 MSH3P20585 1137 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 NTSR1P30989 418 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 ARFIP2P53365 341 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 DNAJB13P59910 316 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 IL2P60568 153 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 ATP6V0D1P61421 351 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 RPS14P62263 151 aaKnown RBP10.02□□□□□ -0.81
APOC1-201ENST00000586638 GRSF1Q12849 480 aaKnown RBP eCLIP10.02□□□□□ -0.81
APOC1-201ENST00000586638 SRSF5Q13243 272 aaKnown RBP10.02□□□□□ -0.81
APOC1-201ENST00000586638 STARD3Q14849 445 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 NUMA1Q14980 2115 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 FBXO48Q5FWF7 155 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 FAM219BQ5XKK7 198 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 RAET1GQ6H3X3 334 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.02□□□□□ -0.81
APOC1-201ENST00000586638 CYP2U1Q7Z449 544 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 SPATS2Q86XZ4 545 aaKnown RBP10.02□□□□□ -0.81
APOC1-201ENST00000586638 NRSN1Q8IZ57 195 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 LSMEM2Q8N112 164 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 HDDC3Q8N4P3 179 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 PTGR2Q8N8N7 351 aaPredicted RBP10.02□□□□□ -0.81
APOC1-201ENST00000586638 AGR3Q8TD06 166 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 INPP5DQ92835 1189 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 GLYATL1Q969I3 302 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 RAB7BQ96AH8 199 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 DCUN1D1Q96GG9 259 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 MSANTD3Q96H12 275 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 GABRG3Q99928 467 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 KCNK13Q9HB14 408 aa10.02□□□□□ -0.81
APOC1-201ENST00000586638 ZFC3H1O60293 1989 aaKnown RBP10.02□□□□□ -0.81
APOC1-201ENST00000586638 F5P12259 2224 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 NCF1BA6NI72 391 aaPredicted RBP10.01□□□□□ -0.81
APOC1-201ENST00000586638 OR2AG2A6NM03 316 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 CCT8L1PA6NM43 557 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 NCF1CA8MVU1 366 aaPredicted RBP10.01□□□□□ -0.81
APOC1-201ENST00000586638 CFAP99D6REC4 459 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 ANKRD65E5RJM6 399 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 K7ESF4 209 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 K7ESM1 405 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 AXIN1O15169 862 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 SGTAO43765 313 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 NPHS1O60500 1241 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 RNASEH2AO75792 299 aaKnown RBP10.01□□□□□ -0.81
APOC1-201ENST00000586638 IPO13O94829 963 aaKnown RBP10.01□□□□□ -0.81
APOC1-201ENST00000586638 KIAA0754O94854 1291 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 UBOX5O94941 541 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 PCCBP05166 539 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 OR56A5P0C7T3 313 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 MTHFD2P13995 350 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 GFAPP14136 432 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 ATP1B2P14415 290 aaPredicted RBP10.01□□□□□ -0.81
APOC1-201ENST00000586638 NCF1P14598 390 aaPredicted RBP10.01□□□□□ -0.81
APOC1-201ENST00000586638 C5AR1P21730 350 aa10.01□□□□□ -0.81
APOC1-201ENST00000586638 PBLDP30039 288 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms