RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 TSPAN17Q96FV3 270 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 OLFM1Q99784 485 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 LRRC61Q9BV99 259 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 TMEM168Q9H0V1 697 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 POPDC3Q9HBV1 291 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 TM7SF3Q9NS93 570 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 SLC23A2Q9UGH3 650 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 KNL1Q8NG31 2342 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 IQANK1A0A1B0GTG1 560 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 LIN7AO14910 233 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 YKT6O15498 198 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 CER1O95813 267 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 SNRPAP09012 282 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 ZNF806P0C7X5 589 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 AOAHP28039 575 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 CCR7P32248 378 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 SKIV2L2P42285 1042 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 IRX4P78413 519 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 ILF3Q12906 894 aaKnown RBP eCLIP16.67■□□□□ 0.269e-9■■□□□ 12.5
PRKCSH-203ENST00000586486 DNAJC3Q13217 504 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 BMPR2Q13873 1038 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 HLA-BQ31612 363 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 PLA2G4EQ3MJ16 856 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 MROH9Q5TGP6 573 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 XKR5Q6UX68 686 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 OTOAQ7RTW8 1153 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 HDXQ7Z353 690 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 CROCCP2Q86T23 111 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 SDR16C5Q8N3Y7 309 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 FSTL5Q8N475 847 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 CD200R1Q8TD46 325 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 GPR21Q99679 349 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 VIPAS39Q9H9C1 493 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 SPASTQ9UBP0 616 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 LGALS13Q9UHV8 139 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 SLC39A10Q9ULF5 831 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 DHRS7Q9Y394 339 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 ST14Q9Y5Y6 855 aa16.67■□□□□ 0.26
PRKCSH-203ENST00000586486 A0A1B0GTQ1 180 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 PIAS2O75928 621 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 CTSEP14091 401 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 PBLDP30039 288 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 SLCO1A2P46721 670 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 CSRP3P50461 194 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 TAS2R39P59534 338 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 CTBSQ01459 385 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 PLOD1Q02809 727 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 RPA4Q13156 261 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 GBX1Q14549 363 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 USP10Q14694 798 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 TMED2Q15363 201 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 ELOCQ15369 112 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 CCDC6Q16204 474 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 GIMAP7Q8NHV1 300 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 ASZ1Q8WWH4 475 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 ELMO1Q92556 727 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 GSDMCQ9BYG8 508 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 COG4Q9H9E3 785 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 FSCN3Q9NQT6 498 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 CTNNAL1Q9UBT7 734 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 TRMT6Q9UJA5 497 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 OTOGLQ3ZCN5 2332 aa16.66■□□□□ 0.26
PRKCSH-203ENST00000586486 SLC5A10A0PJK1 596 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 SCAMP1O15126 338 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 GPC4O75487 556 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 ALDOAP04075 364 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 APOA4P06727 396 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 STMN1P16949 149 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 ENGP17813 658 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 ITGB6P18564 788 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 EPHA8P29322 1005 aaPredicted RBP16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 MAGEA12P43365 314 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 SERPINB8P50452 374 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 SLC12A2P55011 1212 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 NFE2L1Q14494 772 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 SHBQ15464 509 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 TTLL9Q3SXZ7 439 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 PRRT3Q5FWE3 981 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 PLEKHS1Q5SXH7 462 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 METRNLQ641Q3 311 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 TIFABQ6ZNK6 161 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 PIM3Q86V86 326 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 NRROSQ86YC3 692 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 CEP97Q8IW35 865 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 ZBTB2Q8N680 514 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 SIDT2Q8NBJ9 832 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 ZNF548Q8NEK5 533 aaPredicted RBP16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 MZB1Q8WU39 189 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 GLMNQ92990 594 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 SMOC1Q9H4F8 434 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 GAREM1Q9H706 876 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 KLC4Q9NSK0 619 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 NCDNQ9UBB6 729 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 GALPQ9UBC7 116 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 PLEKHM1Q9Y4G2 1056 aa16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 TDRD6O60522 2096 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-203ENST00000586486 LNP1A1A4G5 178 aa16.64■□□□□ 0.25
PRKCSH-203ENST00000586486 SMIM23A6NLE4 172 aa16.64■□□□□ 0.25
PRKCSH-203ENST00000586486 TRIM49D1C9J1S8 452 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms