RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 HDAC3O15379 428 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 ATG13O75143 517 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 UNC5CO95185 931 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 SIX3O95343 332 aaPredicted RBP20.12■□□□□ 0.81
ATG4D-204ENST00000586417 ADH1BP00325 375 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 ACOX1Q15067 660 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 SLC9B1Q4ZJI4 515 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 ACSBG2Q5FVE4 666 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 FAM46CQ5VWP2 391 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 ERN2Q76MJ5 926 aaKnown RBP20.12■□□□□ 0.81
ATG4D-204ENST00000586417 DDHD1Q8NEL9 900 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 DTD2Q96FN9 168 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 SIPA1Q96FS4 1042 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 RILPQ96NA2 401 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 FBRSQ9HAH7 460 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 TNFRSF12AQ9NP84 129 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 KLHL42Q9P2K6 505 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 PRDM4Q9UKN5 801 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 CACNA1IQ9P0X4 2223 aa20.12■□□□□ 0.81
ATG4D-204ENST00000586417 A0A1W2PP55 124 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 TMEM221A6NGB7 291 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 LRRC14BA6NHZ5 514 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 M0R296 226 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 MYO1CO00159 1063 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 WNT9AO14904 365 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 DNAJC8O75937 253 aaPredicted RBP20.11■□□□□ 0.81
ATG4D-204ENST00000586417 GFAPP14136 432 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 C5AR1P21730 350 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 DGKEP52429 567 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 ZNF284Q2VY69 593 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 KHDC1Q4VXA5 237 aaKnown RBP20.11■□□□□ 0.81
ATG4D-204ENST00000586417 PIP5KL1Q5T9C9 394 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 CYP2U1Q7Z449 544 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 FBXO39Q8N4B4 442 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 SPEM1Q8N4L4 309 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 HDDC3Q8N4P3 179 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 VPS35Q96QK1 796 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 HDAC8Q9BY41 377 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 DYRK4Q9NR20 520 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 SAR1AQ9NR31 198 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 TMEM233B4DJY2 109 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 SLCO1B7G3V0H7 640 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 UBFD1O14562 309 aaKnown RBP20.11■□□□□ 0.81
ATG4D-204ENST00000586417 SGTAO43765 313 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 DIAPH2O60879 1101 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 SUPT7LO94864 414 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 CBX6O95503 412 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 DNTTP04053 509 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 SERPINA6P08185 405 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 ATP1B2P14415 290 aaPredicted RBP20.11■□□□□ 0.81
ATG4D-204ENST00000586417 DGKAP23743 735 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 RGS4P49798 205 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 CREB5Q02930 508 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 TMEM52BQ4KMG9 183 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 SH2D4BQ5SQS7 431 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 SEL1L3Q68CR1 1132 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 ANO7Q6IWH7 933 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 SBSNQ6UWP8 590 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 KIAA1324Q6UXG2 1013 aaKnown RBP20.11■□□□□ 0.81
ATG4D-204ENST00000586417 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.11■□□□□ 0.81
ATG4D-204ENST00000586417 CUZD1Q86UP6 607 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 GPSM1Q86YR5 675 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 BTN2A2Q8WVV5 523 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 STON2Q8WXE9 905 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 AP2M1Q96CW1 435 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 PANX3Q96QZ0 392 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 POLMQ9NP87 494 aaPredicted RBP20.11■□□□□ 0.81
ATG4D-204ENST00000586417 FBXL12Q9NXK8 326 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 VTI1BQ9UEU0 232 aa20.11■□□□□ 0.81
ATG4D-204ENST00000586417 APOBEC2Q9Y235 224 aaKnown RBP20.11■□□□□ 0.81
ATG4D-204ENST00000586417 STX16-NPEPL1H3BU86 382 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 STX16O14662 325 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 CCDC22O60826 627 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 MTX2O75431 263 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 RNASEH2AO75792 299 aaKnown RBP20.1■□□□□ 0.81
ATG4D-204ENST00000586417 JUNP05412 331 aaKnown RBP20.1■□□□□ 0.81
ATG4D-204ENST00000586417 OR56A5P0C7T3 313 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 AKT1P31749 480 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 CCR7P32248 378 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 PPP1R3AQ16821 1122 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 TMEM31Q5JXX7 168 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 AGBL4Q5VU57 503 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 CYHR1Q6ZMK1 362 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 RAB44Q7Z6P3 723 aaPredicted RBP20.1■□□□□ 0.81
ATG4D-204ENST00000586417 C1QTNF3Q9BXJ4 246 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 EML4Q9HC35 981 aaKnown RBP20.1■□□□□ 0.81
ATG4D-204ENST00000586417 TXLNGQ9NUQ3 528 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 KCTD5Q9NXV2 234 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 ARMCX1Q9P291 453 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 EBF1Q9UH73 591 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 COQ6Q9Y2Z9 468 aa20.1■□□□□ 0.81
ATG4D-204ENST00000586417 DOCK9Q9BZ29 2069 aa20.09■□□□□ 0.81
ATG4D-204ENST00000586417 CAPN14A8MX76 684 aa20.09■□□□□ 0.81
ATG4D-204ENST00000586417 MAGEC1O60732 1142 aa20.09■□□□□ 0.81
ATG4D-204ENST00000586417 SOD1P00441 154 aa20.09■□□□□ 0.81
ATG4D-204ENST00000586417 RPS17P08708 135 aaKnown RBP20.09■□□□□ 0.81
ATG4D-204ENST00000586417 C7P10643 843 aa20.09■□□□□ 0.81
ATG4D-204ENST00000586417 C6P13671 934 aa20.09■□□□□ 0.81
ATG4D-204ENST00000586417 AOC1P19801 751 aa20.09■□□□□ 0.81
ATG4D-204ENST00000586417 PXNP49023 591 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms