RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 LDB2O43679 373 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 RASSF9O75901 435 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 SLC35G4P0C7Q5 338 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 ATP1B2P14415 290 aaPredicted RBP12.13□□□□□ -0.47
SS18-225ENST00000585121 CA5AP35218 305 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 MC2RQ01718 297 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 CDH17Q12864 832 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 MSLNQ13421 630 aaPredicted RBP12.13□□□□□ -0.47
SS18-225ENST00000585121 GPR18Q14330 331 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 NFE2L1Q14494 772 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 KRT33BQ14525 404 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 PLCL1Q15111 1095 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 RPE65Q16518 533 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 SKIDA1Q1XH10 827 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 BCL7AQ4VC05 210 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 METRNLQ641Q3 311 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 PPP1R21Q6ZMI0 780 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 ZNF662Q6ZS27 426 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 OR2L2Q8NH16 312 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 C1orf54Q8WWF1 131 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 WBP1Q96G27 269 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 LINC00615Q96LM1 132 aaPredicted RBP12.13□□□□□ -0.47
SS18-225ENST00000585121 C9orf72Q96LT7 481 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 TGM7Q96PF1 710 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 FAM96AQ9H5X1 160 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 FBXO8Q9NRD0 319 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 IMP3Q9NV31 184 aaKnown RBP12.13□□□□□ -0.47
SS18-225ENST00000585121 ZDHHC3Q9NYG2 299 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 WDR37Q9Y2I8 494 aa12.13□□□□□ -0.47
SS18-225ENST00000585121 AGAP14A8MT82 685 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 H7C0S8 307 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 C9P02748 559 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 ANKRD34CP0C6C1 535 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 CAPZBP47756 277 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 CACNG1Q06432 222 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 SNX1Q13596 522 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 OASLQ15646 514 aaKnown RBP12.12□□□□□ -0.47
SS18-225ENST00000585121 FAM83HQ6ZRV2 1179 aaPredicted RBP12.12□□□□□ -0.47
SS18-225ENST00000585121 SERPINA9Q86WD7 417 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 DTX1Q86Y01 620 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 CFAP206Q8IYR0 622 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 IL22RA1Q8N6P7 574 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 HM13Q8TCT9 377 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.12□□□□□ -0.47
SS18-225ENST00000585121 C12orf66Q96MD2 445 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 BBC3Q96PG8 261 aaPredicted RBP12.12□□□□□ -0.47
SS18-225ENST00000585121 TTC1Q99614 292 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 CCM2Q9BSQ5 444 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 WWP1Q9H0M0 922 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 OGFRQ9NZT2 677 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 PAK5Q9P286 719 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 FAM8A1Q9UBU6 413 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 HEBP2Q9Y5Z4 205 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 COLEC10Q9Y6Z7 277 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 LOC400499M0QZD8 3231 aa12.12□□□□□ -0.47
SS18-225ENST00000585121 POLR1CO15160 346 aaPredicted RBP12.11□□□□□ -0.47
SS18-225ENST00000585121 POLBP06746 335 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 MTHFD1P11586 935 aaKnown RBP12.11□□□□□ -0.47
SS18-225ENST00000585121 ACRV1P26436 265 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 NDUFS1P28331 727 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 PRLHRP49683 370 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 GFERP55789 205 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 FOXM1Q08050 763 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 CCNG2Q16589 344 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 CACHD1Q5VU97 1274 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 ANKS6Q68DC2 871 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 IRGCQ6NXR0 463 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 CYB5D1Q6P9G0 228 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 C4orf22Q6V702 233 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 GSTA5Q7RTV2 222 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 CACNA2D3Q8IZS8 1091 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 OR52K1Q8NGK4 314 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 ZFPM2Q8WW38 1151 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 JPH3Q8WXH2 748 aaPredicted RBP12.11□□□□□ -0.47
SS18-225ENST00000585121 CDKN2AIPNLQ96HQ2 116 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 ETNK1Q9HBU6 452 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 RAB6BQ9NRW1 208 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 EPHA6Q9UF33 1036 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 ZKSCAN5Q9Y2L8 839 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 MGAQ8IWI9 3026 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 C17orf113A0A1B0GUU1 675 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 HEATR9A2RTY3 570 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 F8W8V4 182 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 QSOX1O00391 747 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 IFRD1O00458 451 aaPredicted RBP12.11□□□□□ -0.47
SS18-225ENST00000585121 CCL22O00626 93 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 EFSO43281 561 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 SUN1O94901 812 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 GSTM1P09488 218 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 SEPHS1P49903 392 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 GSTM4Q03013 218 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 ARMC6Q6NXE6 501 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 PRSS42Q7Z5A4 293 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 VASH2Q86V25 355 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 BMPERQ8N8U9 685 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 RSC1A1Q92681 617 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 INSM2Q96T92 566 aaPredicted RBP12.11□□□□□ -0.47
SS18-225ENST00000585121 CTRCQ99895 268 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 RAB33BQ9H082 229 aa12.11□□□□□ -0.47
SS18-225ENST00000585121 TRIT1Q9H3H1 467 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms