RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 PIGXQ8TBF5 258 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 STYXQ8WUJ0 223 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 FEM1AQ9BSK4 669 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TBC1D17Q9HA65 648 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 C12orf4Q9NQ89 552 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 EFNA1P20827 205 aaPredicted RBP13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 GET4Q7L5D6 327 aaPredicted RBP13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 LAPTM4BQ86VI4 370 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ZZZ3Q8IYH5 903 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 UNC5BQ8IZJ1 945 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 RELTQ969Z4 430 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 AGAP2Q99490 1192 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 DHX33Q9H6R0 707 aaKnown RBP13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 DERAQ9Y315 318 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PTPRJQ12913 1337 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SCN1BQ07699 218 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 NDUFA9Q16795 377 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ARSHQ5FYA8 562 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ZNF615Q8N8J6 731 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SPATA22Q8NHS9 363 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SETD6Q8TBK2 473 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 METTL21AQ8WXB1 218 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 NKD1Q969G9 470 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 MFSD3Q96ES6 412 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 MST1RQ04912 1400 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CCNB2O95067 398 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 RTP1P59025 263 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 LCP2Q13094 533 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CHST9Q7L1S5 443 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SPPL2BQ8TCT7 592 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 LENG8Q96PV6 779 aaPredicted RBP13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 NR2E3Q9Y5X4 410 aa13.12□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SAGE2PA6NJ88 616 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 OR1F1O43749 312 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 AP2A1O95782 977 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 APODP05090 189 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TACR2P21452 398 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ALDH4A1P30038 563 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 GPD2P43304 727 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SLC5A3P53794 718 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 AP3S2P59780 193 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PPP3R1P63098 170 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 UBAP2Q5T6F2 1119 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 OR10A6Q8NH74 314 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 NODALQ96S42 347 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 DEC1Q9P2X7 70 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CHRM5P08912 532 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 OGFOD2Q6N063 350 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CNTD1Q8N815 330 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ZCCHC10Q8TBK6 192 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 GAL3ST4Q96RP7 486 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 IFT46Q9NQC8 304 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CCDC177Q9NQR7 707 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 KLF15Q9UIH9 416 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PRAMEF33A0A0G2JMD5 474 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 LSM1O15116 133 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PRAMEF10O60809 474 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 NME6O75414 186 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SNX4O95219 450 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 EPHX1P07099 455 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 GLUD2P49448 558 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TXNL4AP83876 142 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SLC20A2Q08357 652 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 GFOD2Q3B7J2 385 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 MSANTD2Q6P1R3 559 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ZCCHC12Q6PEW1 402 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 USP30Q70CQ3 517 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 GALNT13Q8IUC8 556 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ZNF781Q8N8C0 355 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 OR2L3Q8NG85 312 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 OR14C36Q8NHC7 312 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 NAT14Q8WUY8 206 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 EFHD2Q96C19 240 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CENPNQ96H22 339 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 JSRP1Q96MG2 331 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 MARK1Q9P0L2 795 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TCAF1Q9Y4C2 921 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 COLEC10Q9Y6Z7 277 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ENPP3O14638 875 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PER2O15055 1255 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 OR4F21O95013 312 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TSPAN5P62079 268 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SP3Q02447 781 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CHIT1Q13231 466 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ACAP2Q15057 778 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 FITM2Q8N6M3 262 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 TTC29Q8NA56 475 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 RCOR3Q9P2K3 495 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SIGLEC1Q9BZZ2 1709 aa13.11□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SMIM28A0A1B0GU29 152 aa13.1□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ADAMDEC1O15204 470 aa13.1□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CILPO75339 1184 aa13.1□□□□□ -0.31
RAB11FIP4-210ENST00000585058 PEX2P28328 305 aa13.1□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CMPK1P30085 196 aa13.1□□□□□ -0.31
RAB11FIP4-210ENST00000585058 LIMK2P53671 638 aa13.1□□□□□ -0.31
RAB11FIP4-210ENST00000585058 CDH4P55283 916 aa13.1□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ZNF460Q14592 562 aa13.1□□□□□ -0.31
RAB11FIP4-210ENST00000585058 LIN52Q52LA3 116 aa13.1□□□□□ -0.31
RAB11FIP4-210ENST00000585058 ANKRD22Q5VYY1 191 aa13.1□□□□□ -0.31
RAB11FIP4-210ENST00000585058 SRFBP1Q8NEF9 429 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms