RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SAE1Q9UBE0 346 aaPredicted RBP14.68□□□□□ -0.06
VAPA-209ENST00000585042 MGAT4DA6NG13 374 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 SPOPO43791 374 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 ZRANB2O95218 330 aaKnown RBP eCLIP14.67□□□□□ -0.062e-6■■□□□ 12.5
VAPA-209ENST00000585042 MTHFD1P11586 935 aaKnown RBP14.67□□□□□ -0.06
VAPA-209ENST00000585042 COMTP21964 271 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 PTPN4P29074 926 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 ARL4DP49703 201 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 RPS15P62841 145 aaKnown RBP14.67□□□□□ -0.06
VAPA-209ENST00000585042 XRCC4Q13426 336 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 SEMA5AQ13591 1074 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 UGT8Q16880 541 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 GPRC6AQ5T6X5 926 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 SPOCD1Q6ZMY3 1216 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 B4GALNT4Q76KP1 1039 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 ATCAYQ86WG3 371 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 ZNF567Q8N184 647 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 FAM26EQ8N5C1 309 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 ZNF398Q8TD17 642 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 CT55Q8WUE5 264 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 LINC00615Q96LM1 132 aaPredicted RBP14.67□□□□□ -0.06
VAPA-209ENST00000585042 MAP3K3Q99759 626 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 TRIM5Q9C035 493 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 LATS2Q9NRM7 1088 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 SPTLC3Q9NUV7 552 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 KLHL8Q9P2G9 620 aaPredicted RBP14.67□□□□□ -0.06
VAPA-209ENST00000585042 TLK1Q9UKI8 766 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 MAN2B2Q9Y2E5 1009 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 ALG6Q9Y672 507 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 DOPEY2Q9Y3R5 2298 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 NBASA2RRP1 2371 aa14.67□□□□□ -0.06
VAPA-209ENST00000585042 UBA6A0AVT1 1052 aaPredicted RBP14.66□□□□□ -0.06
VAPA-209ENST00000585042 CDC14CA4D256 554 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 OR5K3A6NET4 321 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 C5orf60A6NFR6 353 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 C2orf81A6NN90 581 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 GAPDHSO14556 408 aaPredicted RBP14.66□□□□□ -0.06
VAPA-209ENST00000585042 STX7O15400 261 aaKnown RBP14.66□□□□□ -0.06
VAPA-209ENST00000585042 MFAP3LO75121 409 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 ANXA9O76027 345 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 ZBTB11O95625 1053 aaPredicted RBP14.66□□□□□ -0.06
VAPA-209ENST00000585042 GP1BBP13224 206 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 PECAM1P16284 738 aaPredicted RBP14.66□□□□□ -0.06
VAPA-209ENST00000585042 MSH3P20585 1137 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 NDUFS1P28331 727 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 CTSCP53634 463 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 TUBB4BP68371 445 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 TUBB2AQ13885 445 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 PLCL1Q15111 1095 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 DNTTIP2Q5QJE6 756 aaKnown RBP14.66□□□□□ -0.06
VAPA-209ENST00000585042 FAM182AQ5T1J6 154 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 TMTC4Q5T4D3 741 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 FAM151BQ6UXP7 276 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 ZNF517Q6ZMY9 492 aaPredicted RBP14.66□□□□□ -0.06
VAPA-209ENST00000585042 SYVN1Q86TM6 617 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 OOSP2Q86WS3 158 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 VSTM4Q8IW00 320 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 KATNAL2Q8IYT4 538 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 SLC25A41Q8N5S1 370 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 OR2L2Q8NH16 312 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 BLOC1S5Q8TDH9 187 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 OXNAD1Q96HP4 312 aaPredicted RBP14.66□□□□□ -0.06
VAPA-209ENST00000585042 LRFN5Q96NI6 719 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 FERMT1Q9BQL6 677 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 CCM2Q9BSQ5 444 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 TUBB2BQ9BVA1 445 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 ACTL8Q9H568 366 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 KIR3DX1Q9H7L2 352 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 SYTL2Q9HCH5 934 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 KCND1Q9NSA2 647 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 HRASLS2Q9NWW9 162 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 PSMD13Q9UNM6 376 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 FARSAQ9Y285 508 aaKnown RBP14.66□□□□□ -0.06
VAPA-209ENST00000585042 PCDHGA9Q9Y5G4 932 aaKnown RBP14.66□□□□□ -0.06
VAPA-209ENST00000585042 COLEC10Q9Y6Z7 277 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 LRRK2Q5S007 2527 aa14.66□□□□□ -0.06
VAPA-209ENST00000585042 OR2AG2A6NM03 316 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 AGAP14A8MT82 685 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 CPNE3O75131 537 aaKnown RBP14.65□□□□□ -0.06
VAPA-209ENST00000585042 TIAF1O95411 115 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 TNNT1P13805 278 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 LPOP22079 712 aaPredicted RBP14.65□□□□□ -0.06
VAPA-209ENST00000585042 CHRNA4P43681 627 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 GEMP55040 296 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 NFE2L1Q14494 772 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 NOMO1Q15155 1222 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 TAF1AQ15573 450 aaPredicted RBP14.65□□□□□ -0.06
VAPA-209ENST00000585042 BCL7AQ4VC05 210 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 IZUMO3Q5VZ72 239 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 KAZNQ674X7 775 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 ARMC6Q6NXE6 501 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 SARM1Q6SZW1 724 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 FAM83HQ6ZRV2 1179 aaPredicted RBP14.65□□□□□ -0.06
VAPA-209ENST00000585042 ZC3H18Q86VM9 953 aaKnown RBP14.65□□□□□ -0.06
VAPA-209ENST00000585042 CNGA4Q8IV77 575 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 GPR150Q8NGU9 434 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 HEXDCQ8WVB3 486 aa14.65□□□□□ -0.06
VAPA-209ENST00000585042 QKIQ96PU8 341 aaKnown RBP eCLIP14.65□□□□□ -0.061e-14■■■■■ 35.1
VAPA-209ENST00000585042 INSM2Q96T92 566 aaPredicted RBP14.65□□□□□ -0.06
VAPA-209ENST00000585042 FSD1LQ9BXM9 530 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms