RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 RPE65Q16518 533 aa20.01■□□□□ 0.79
SS18-224ENST00000584083 DRICH1Q6PGQ1 229 aaPredicted RBP20.01■□□□□ 0.79
SS18-224ENST00000584083 ZFAND4Q86XD8 727 aa20.01■□□□□ 0.79
SS18-224ENST00000584083 CFAP206Q8IYR0 622 aa20.01■□□□□ 0.79
SS18-224ENST00000584083 WWP1Q9H0M0 922 aa20.01■□□□□ 0.79
SS18-224ENST00000584083 IMP3Q9NV31 184 aaKnown RBP20.01■□□□□ 0.79
SS18-224ENST00000584083 OCIAD1Q9NX40 245 aa20.01■□□□□ 0.79
SS18-224ENST00000584083 OGFRQ9NZT2 677 aa20.01■□□□□ 0.79
SS18-224ENST00000584083 ACSL5Q9ULC5 683 aa20.01■□□□□ 0.79
SS18-224ENST00000584083 HEATR9A2RTY3 570 aa20■□□□□ 0.79
SS18-224ENST00000584083 SGTAO43765 313 aa20■□□□□ 0.79
SS18-224ENST00000584083 SLC35G4P0C7Q5 338 aa20■□□□□ 0.79
SS18-224ENST00000584083 PRSS56P0CW18 603 aa20■□□□□ 0.79
SS18-224ENST00000584083 LIPCP11150 499 aa20■□□□□ 0.79
SS18-224ENST00000584083 ACRV1P26436 265 aa20■□□□□ 0.79
SS18-224ENST00000584083 GRIA1P42261 906 aa20■□□□□ 0.79
SS18-224ENST00000584083 KCNJ1P48048 391 aa20■□□□□ 0.79
SS18-224ENST00000584083 TGIF1Q15583 401 aa20■□□□□ 0.79
SS18-224ENST00000584083 ARHGAP40Q5TG30 622 aa20■□□□□ 0.79
SS18-224ENST00000584083 ARHGAP22Q7Z5H3 698 aa20■□□□□ 0.79
SS18-224ENST00000584083 GPR150Q8NGU9 434 aa20■□□□□ 0.79
SS18-224ENST00000584083 LINC00615Q96LM1 132 aaPredicted RBP20■□□□□ 0.79
SS18-224ENST00000584083 TGM7Q96PF1 710 aa20■□□□□ 0.79
SS18-224ENST00000584083 B3GNT4Q9C0J1 378 aa20■□□□□ 0.79
SS18-224ENST00000584083 HOMER3Q9NSC5 361 aa20■□□□□ 0.79
SS18-224ENST00000584083 PCDHB11Q9Y5F2 797 aa20■□□□□ 0.79
SS18-224ENST00000584083 CFAP20Q9Y6A4 193 aaKnown RBP20■□□□□ 0.79
SS18-224ENST00000584083 TRBV5-4A0A0C4DH59 114 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 B4E171 279 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 MTHFD1P11586 935 aaKnown RBP19.99■□□□□ 0.79
SS18-224ENST00000584083 MSNP26038 577 aaKnown RBP19.99■□□□□ 0.79
SS18-224ENST00000584083 CD82P27701 267 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 TSPAN7P41732 249 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 PRLHRP49683 370 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 ARSDP51689 593 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 GFERP55789 205 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 VAC14Q08AM6 782 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 C4orf22Q6V702 233 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 PIANPQ8IYJ0 282 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 HM13Q8TCT9 377 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 C9orf72Q96LT7 481 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 C12orf66Q96MD2 445 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 CCNL2Q96S94 520 aaPredicted RBP19.99■□□□□ 0.79
SS18-224ENST00000584083 CASS4Q9NQ75 786 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 SMARCAL1Q9NZC9 954 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 JRKLQ9Y4A0 524 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 SDK2Q58EX2 2172 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 ZFHX4Q86UP3 3567 aa19.99■□□□□ 0.79
SS18-224ENST00000584083 MN1Q10571 1320 aaPredicted RBP19.99■□□□□ 0.79
SS18-224ENST00000584083 CACNA1GO43497 2377 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 IGLV3-16A0A075B6K0 115 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 CCDC162PA2VCL2 907 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 OR51F1A6NGY5 319 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 CAPN5O15484 640 aaPredicted RBP19.98■□□□□ 0.79
SS18-224ENST00000584083 ADRA1DP25100 572 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 BASP1P80723 227 aaKnown RBP19.98■□□□□ 0.79
SS18-224ENST00000584083 GSE1Q14687 1217 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 PLCL1Q15111 1095 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 DCAF12Q5T6F0 453 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 CCDC81Q6ZN84 652 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 JPH3Q8WXH2 748 aaPredicted RBP19.98■□□□□ 0.79
SS18-224ENST00000584083 RSC1A1Q92681 617 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 HDAC10Q969S8 669 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 PMEPA1Q969W9 287 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 RANBP9Q96S59 729 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 INSM2Q96T92 566 aaPredicted RBP19.98■□□□□ 0.79
SS18-224ENST00000584083 CCM2Q9BSQ5 444 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 DDA1Q9BW61 102 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 ASPSCR1Q9BZE9 553 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 VPS37BQ9H9H4 285 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 SSUH2Q9Y2M2 353 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 PCDHGA3Q9Y5H0 932 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 B3GALT1Q9Y5Z6 326 aa19.98■□□□□ 0.79
SS18-224ENST00000584083 RASSF9O75901 435 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 C9P02748 559 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 PSMA3P25788 255 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 CAPZBP47756 277 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 LEPRP48357 1165 aaKnown RBP19.97■□□□□ 0.79
SS18-224ENST00000584083 RAB15P59190 212 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 MC2RQ01718 297 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 KRT33BQ14525 404 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 DBN1Q16643 649 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 TSTD2Q5T7W7 516 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 ANKS6Q68DC2 871 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 IRGCQ6NXR0 463 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 DUS1LQ6P1R4 473 aaKnown RBP19.97■□□□□ 0.79
SS18-224ENST00000584083 ZNF449Q6P9G9 518 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 KLHL35Q6PF15 583 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 LILRA3Q8N6C8 439 aaPredicted RBP19.97■□□□□ 0.79
SS18-224ENST00000584083 CLDN19Q8N6F1 224 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 BMPERQ8N8U9 685 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 PRELID2Q8N945 189 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 PPHLN1Q8NEY8 458 aaKnown RBP19.97■□□□□ 0.79
SS18-224ENST00000584083 SPDYE1Q8NFV5 336 aaPredicted RBP19.97■□□□□ 0.79
SS18-224ENST00000584083 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.97■□□□□ 0.79
SS18-224ENST00000584083 ZDHHC12Q96GR4 267 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 SLC2A6Q9UGQ3 507 aa19.97■□□□□ 0.79
SS18-224ENST00000584083 TEX51A0A1B0GUA7 166 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 C17orf113A0A1B0GUU1 675 aa19.96■□□□□ 0.79
SS18-224ENST00000584083 STMND1H3BQB6 276 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms