RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 ITGA3P26006 1051 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 GPR143P51810 404 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 MFAP5Q13361 173 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 TUBB2AQ13885 445 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 ZSCAN23Q3MJ62 389 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 INTS11Q5TA45 600 aaKnown RBP3.63□□□□□ -1.83
COPS3-217ENST00000583160 ZDHHC20Q5W0Z9 365 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 ALS2CLQ60I27 953 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 TMEM198Q66K66 360 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 GTSCR1Q86UQ5 136 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 PLD3Q8IV08 490 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 IL17REQ8NFR9 667 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 TMEM143Q96AN5 459 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 POM121L2Q96KW2 1035 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 C1orf74Q96LT6 269 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 ATOH8Q96SQ7 321 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 TUBB2BQ9BVA1 445 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 WDR13Q9H1Z4 485 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 MBNL1Q9NR56 388 aaKnown RBP3.63□□□□□ -1.83
COPS3-217ENST00000583160 PGAP2Q9UHJ9 254 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 GTF2A1LQ9UNN4 478 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 MTMR6Q9Y217 621 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 TMEM98Q9Y2Y6 226 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 PYGO1Q9Y3Y4 419 aa3.63□□□□□ -1.83
COPS3-217ENST00000583160 RSF1Q96T23 1441 aaPredicted RBP3.62□□□□□ -1.83
COPS3-217ENST00000583160 TOP2AP11388 1531 aaKnown RBP3.62□□□□□ -1.83
COPS3-217ENST00000583160 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 TMEM8BA6NDV4 472 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 CSPG5O95196 566 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 NADKO95544 446 aaPredicted RBP3.62□□□□□ -1.83
COPS3-217ENST00000583160 EML2O95834 649 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 CLPTM1O96005 669 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 TMEM11P17152 192 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 THOP1P52888 689 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 EIF4A2Q14240 407 aaKnown RBP3.62□□□□□ -1.83
COPS3-217ENST00000583160 ACSM2BQ68CK6 577 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 NCEH1Q6PIU2 408 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 DENND5BQ6ZUT9 1274 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 SMC5Q8IY18 1101 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 SLC47A1Q96FL8 570 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 PSMD1Q99460 953 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 DENND2DQ9H6A0 471 aaPredicted RBP3.62□□□□□ -1.83
COPS3-217ENST00000583160 ZNF71Q9NQZ8 489 aaPredicted RBP3.62□□□□□ -1.83
COPS3-217ENST00000583160 SMC4Q9NTJ3 1288 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 SETD4Q9NVD3 440 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 COQ3Q9NZJ6 369 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 RABGAP1Q9Y3P9 1069 aa3.62□□□□□ -1.83
COPS3-217ENST00000583160 FANCD2Q9BXW9 1451 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 CEP164Q9UPV0 1460 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 RUSC2Q8N2Y8 1516 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 MEIOCA2RUB1 952 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 TMEM63AO94886 807 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 NGFP01138 241 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 HMBSP08397 361 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 PSMA4P25789 261 aaKnown RBP3.61□□□□□ -1.83
COPS3-217ENST00000583160 BMXP51813 675 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 KRTAP10-3P60369 221 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 G3BP1Q13283 466 aaKnown RBP eCLIP3.61□□□□□ -1.83
COPS3-217ENST00000583160 GTDC1Q4AE62 458 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 ISCA2Q86U28 154 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 GALNT13Q8IUC8 556 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 GPALPP1Q8IXQ4 340 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 CRYBG2Q8N1P7 616 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 TMTC2Q8N394 836 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 PDILTQ8N807 584 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 PCYOX1LQ8NBM8 494 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 ZNF689Q96CS4 500 aaPredicted RBP3.61□□□□□ -1.83
COPS3-217ENST00000583160 ELMOD3Q96FG2 381 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 GMPPAQ96IJ6 420 aaPredicted RBP3.61□□□□□ -1.83
COPS3-217ENST00000583160 GAD1Q99259 594 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 NCAPGQ9BPX3 1015 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 RTP3Q9BQQ7 232 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 PYGO2Q9BRQ0 406 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 TRIM15Q9C019 465 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 ATAD3AQ9NVI7 634 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 MIOSQ9NXC5 875 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 BARHL2Q9NY43 387 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 PIAS3Q9Y6X2 628 aa3.61□□□□□ -1.83
COPS3-217ENST00000583160 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 A0A0J9YWU9 116 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 OR6C76A6NM76 312 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 NPHP1O15259 732 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 SORBS2O94875 1100 aaKnown RBP3.6□□□□□ -1.83
COPS3-217ENST00000583160 ACTN1P12814 892 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 CDH2P19022 906 aaPredicted RBP3.6□□□□□ -1.83
COPS3-217ENST00000583160 CEACAM8P31997 349 aaPredicted RBP3.6□□□□□ -1.83
COPS3-217ENST00000583160 KRT9P35527 623 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 CDH11P55287 796 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 GAGE2BQ13066 116 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 PRKAA1Q13131 559 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 PCGF3Q3KNV8 242 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 GAGE2EQ4V326 116 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 ADAMTSL4-AS1Q5T5F5 129 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 GKAP1Q5VSY0 366 aaPredicted RBP3.6□□□□□ -1.83
COPS3-217ENST00000583160 GAGE2AQ6NT46 116 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 KLC3Q6P597 504 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 BHLHB9Q6PI77 547 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 ZNF843Q8N446 348 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 L3MBTL4Q8NA19 623 aa3.6□□□□□ -1.83
COPS3-217ENST00000583160 PPHLN1Q8NEY8 458 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms