RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 PTPRCAPQ14761 206 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 EFTUD2Q15029 972 aaKnown RBP eCLIP13.31□□□□□ -0.286e-7■□□□□ 10.7
CSNK1D-220ENST00000581737 ANKRD20A4Q4UJ75 823 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 TMPRSS7Q7RTY8 843 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 KCNMB4Q86W47 210 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 PHACTR4Q8IZ21 702 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 MPP5Q8N3R9 675 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 OR13J1Q8NGT2 312 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 GDAP1Q8TB36 358 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 SETD7Q8WTS6 366 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 HEXDCQ8WVB3 486 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 CDKN2AIPNLQ96HQ2 116 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 TSNARE1Q96NA8 513 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 TTC1Q99614 292 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 PLCD4Q9BRC7 762 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 SLC13A1Q9BZW2 595 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 ASB8Q9H765 288 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 RMI1Q9H9A7 625 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 CHRAC1Q9NRG0 131 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 MKS1Q9NXB0 559 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 APOBEC3BQ9UH17 382 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 CRLS1Q9UJA2 301 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 SLC17A4Q9Y2C5 497 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 BTBD3Q9Y2F9 522 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 PCDHGB2Q9Y5G2 931 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 DGKBQ9Y6T7 804 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 FLNBO75369 2602 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 HELZ2Q9BYK8 2649 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 TDRD6O60522 2096 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 PRSS38A1L453 326 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 CCDC78A2IDD5 438 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 TMEM202A6NGA9 273 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 TRIM49D1C9J1S8 452 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 CFAP99D6REC4 459 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 EBAG9O00559 213 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 GAPDHSO14556 408 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 VEGFDO43915 354 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 C1QL1O75973 258 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 TNFP01375 233 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 RALBP11234 206 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 JUNDP17535 347 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 EPHA8P29322 1005 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 PPARGP37231 505 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 CCT5P48643 541 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 POLD2P49005 469 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 XIAPP98170 497 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 DMTNQ08495 405 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 EIF2B5Q13144 721 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 CAMK2BQ13554 666 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 PEX6Q13608 980 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 THOC5Q13769 683 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 GTF2H3Q13889 308 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 SUZ12Q15022 739 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 DBN1Q16643 649 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 ZSCAN26Q16670 478 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 ALG11Q2TAA5 492 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 ZRANB3Q5FWF4 1079 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 AARS2Q5JTZ9 985 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 TPRG1LQ5T0D9 272 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 GKAP1Q5VSY0 366 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 LYPLAL1Q5VWZ2 237 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 KIAA0930Q6ICG6 404 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 DOK6Q6PKX4 331 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 TIFABQ6ZNK6 161 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 HID1Q8IV36 788 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 CYP4X1Q8N118 509 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 NXPE1Q8N323 547 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 ANKS4BQ8N8V4 417 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 DDHD1Q8NEL9 900 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 OR6P1Q8NGX9 317 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 SREK1Q8WXA9 508 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 HDAC10Q969S8 669 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 GRAMD1AQ96CP6 724 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 MAGEB18Q96M61 343 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 LGR4Q9BXB1 951 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 TRIM39Q9HCM9 518 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 FGF22Q9HCT0 170 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 TM7SF3Q9NS93 570 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 TREX1Q9NSU2 369 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 C20orf96Q9NUD7 363 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 SPASTQ9UBP0 616 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 MOSPD1Q9UJG1 213 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 MID2Q9UJV3 735 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 CNOT6Q9ULM6 557 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 APC2O95996 2303 aa13.3□□□□□ -0.28
CSNK1D-220ENST00000581737 CCDC162PA2VCL2 907 aa13.29□□□□□ -0.28
CSNK1D-220ENST00000581737 TRABD2BA6NFA1 517 aa13.29□□□□□ -0.28
CSNK1D-220ENST00000581737 CYSRT1A8MQ03 144 aa13.29□□□□□ -0.28
CSNK1D-220ENST00000581737 AGAP14A8MT82 685 aa13.29□□□□□ -0.28
CSNK1D-220ENST00000581737 PCDHGA12O60330 932 aa13.29□□□□□ -0.28
CSNK1D-220ENST00000581737 UGT1A9O60656 530 aa13.29□□□□□ -0.28
CSNK1D-220ENST00000581737 CEACAM5P06731 702 aa13.29□□□□□ -0.28
CSNK1D-220ENST00000581737 VIMP08670 466 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-220ENST00000581737 CTSEP14091 401 aa13.29□□□□□ -0.28
CSNK1D-220ENST00000581737 UGT1A6P19224 532 aa13.29□□□□□ -0.28
CSNK1D-220ENST00000581737 UGT1A1P22309 533 aa13.29□□□□□ -0.28
CSNK1D-220ENST00000581737 UGT1A4P22310 534 aa13.29□□□□□ -0.28
CSNK1D-220ENST00000581737 AKT1P31749 480 aa13.29□□□□□ -0.28
CSNK1D-220ENST00000581737 UGT1A3P35503 534 aa13.29□□□□□ -0.28
CSNK1D-220ENST00000581737 UGT1A5P35504 534 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1000.3 ms