RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 OXNAD1Q96HP4 312 aaPredicted RBP10.37□□□□□ -0.75
RFFL-209ENST00000581265 ZNF514Q96K75 400 aaPredicted RBP10.37□□□□□ -0.75
RFFL-209ENST00000581265 MRGPRX2Q96LB1 330 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 CCDC42Q96M95 316 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 FCRL5Q96RD9 977 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 CD180Q99467 661 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 VAT1Q99536 393 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 MAP3K3Q99759 626 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 ZCCHC2Q9C0B9 1178 aaKnown RBP10.37□□□□□ -0.75
RFFL-209ENST00000581265 TWSG1Q9GZX9 223 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 AKIRIN1Q9H9L7 192 aaPredicted RBP10.37□□□□□ -0.75
RFFL-209ENST00000581265 FGF21Q9NSA1 209 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 INTUQ9ULD6 942 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 CDC14CA4D256 554 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 KLHL33A6NCF5 533 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 GAPDHSO14556 408 aaPredicted RBP10.36□□□□□ -0.75
RFFL-209ENST00000581265 CST8O60676 142 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 PECAM1P16284 738 aaPredicted RBP10.36□□□□□ -0.75
RFFL-209ENST00000581265 NFKB1P19838 968 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 HLA-DPA1P20036 260 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 NR1D1P20393 614 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 COMTP21964 271 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 TNFRSF8P28908 595 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 PTPN4P29074 926 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 CA5AP35218 305 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 CHRNA4P43681 627 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 TNNT3P45378 269 aaPredicted RBP10.36□□□□□ -0.75
RFFL-209ENST00000581265 HSD11B2P80365 405 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 MPP3Q13368 585 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 SEMA5AQ13591 1074 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 ITGA9Q13797 1035 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 NFE2L1Q14494 772 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 KCNAB1Q14722 419 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 NOMO1Q15155 1222 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 SLC1A5Q15758 541 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 PPP2R5EQ16537 467 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 LONRF2Q1L5Z9 754 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 GPRC6AQ5T6X5 926 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 FAM151BQ6UXP7 276 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 ZNF517Q6ZMY9 492 aaPredicted RBP10.36□□□□□ -0.75
RFFL-209ENST00000581265 PID1Q7Z2X4 250 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 SRRM1Q8IYB3 904 aaKnown RBP10.36□□□□□ -0.75
RFFL-209ENST00000581265 ZNF567Q8N184 647 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 CARFQ8N187 725 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 D2HGDHQ8N465 521 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 SLC25A41Q8N5S1 370 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 GPR150Q8NGU9 434 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 ZNF398Q8TD17 642 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 THAP4Q8WY91 577 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 P3H4Q92791 437 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 ACTL8Q9H568 366 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 NHEJ1Q9H9Q4 299 aaPredicted RBP10.36□□□□□ -0.75
RFFL-209ENST00000581265 ABHD10Q9NUJ1 306 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 SPTLC3Q9NUV7 552 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 SMOXQ9NWM0 555 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 HRASLS2Q9NWW9 162 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 ACSL5Q9ULC5 683 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 PSMD13Q9UNM6 376 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 PKP3Q9Y446 797 aa10.36□□□□□ -0.75
RFFL-209ENST00000581265 OR5K3A6NET4 321 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 MGAT4DA6NG13 374 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 TLCD2A6NGC4 264 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 OR2AG2A6NM03 316 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 GPR39O43194 453 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 EBLN1P0CF75 366 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 MTHFD1P11586 935 aaKnown RBP10.35□□□□□ -0.75
RFFL-209ENST00000581265 TNNT1P13805 278 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 ARL4DP49703 201 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 MLLT10P55197 1068 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 TUBB4BP68371 445 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 ADCY2Q08462 1091 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 LAMB3Q13751 1172 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 TUBB2AQ13885 445 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 UGT8Q16880 541 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 DNTTIP2Q5QJE6 756 aaKnown RBP10.35□□□□□ -0.75
RFFL-209ENST00000581265 FNBP1LQ5T0N5 605 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 FAM199XQ6PEV8 388 aaPredicted RBP10.35□□□□□ -0.75
RFFL-209ENST00000581265 CERS6Q6ZMG9 384 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 SPOCD1Q6ZMY3 1216 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 GLT6D1Q7Z4J2 308 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 SYVN1Q86TM6 617 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 OR8K5Q8NH50 307 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 BLOC1S5Q8TDH9 187 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 INSM2Q96T92 566 aaPredicted RBP10.35□□□□□ -0.75
RFFL-209ENST00000581265 ANP32EQ9BTT0 268 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 TUBB2BQ9BVA1 445 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 MLXIPLQ9NP71 852 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 KCND1Q9NSA2 647 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 IMP3Q9NV31 184 aaKnown RBP10.35□□□□□ -0.75
RFFL-209ENST00000581265 KLHL8Q9P2G9 620 aaPredicted RBP10.35□□□□□ -0.75
RFFL-209ENST00000581265 SLC24A2Q9UI40 661 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 TRHDEQ9UKU6 1024 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 FARSAQ9Y285 508 aaKnown RBP10.35□□□□□ -0.75
RFFL-209ENST00000581265 HYOU1Q9Y4L1 999 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 PCDHGA9Q9Y5G4 932 aaKnown RBP10.35□□□□□ -0.75
RFFL-209ENST00000581265 ALG6Q9Y672 507 aa10.35□□□□□ -0.75
RFFL-209ENST00000581265 ZNF106Q9H2Y7 1883 aaKnown RBP10.35□□□□□ -0.75
RFFL-209ENST00000581265 UBA6A0AVT1 1052 aaPredicted RBP10.34□□□□□ -0.75
RFFL-209ENST00000581265 AGAP14A8MT82 685 aa10.34□□□□□ -0.75
RFFL-209ENST00000581265 HACD1B0YJ81 288 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms