RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 HEMGNQ9BXL5 484 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 SYTL2Q9HCH5 934 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 LATS2Q9NRM7 1088 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 KCND3Q9UK17 655 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 WDR37Q9Y2I8 494 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 KCTD3Q9Y597 815 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 HEMK1Q9Y5R4 338 aaPredicted RBP14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 LRRK2Q5S007 2527 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 TRBV5-4A0A0C4DH59 114 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 LOC101059948A0A1B0GTJ6 334 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 RCCD1A6NED2 376 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 TLCD2A6NGC4 264 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 C21orf140B9A014 251 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 UGT1A9O60656 530 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 AGTP01019 485 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 FAM87AP0C7U9 286 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 TYRP1P17643 537 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 UGT1A6P19224 532 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 MSH3P20585 1137 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 UGT1A1P22309 533 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 UGT1A4P22310 534 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 CD151P48509 253 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 PPM1FP49593 454 aaPredicted RBP14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 PRLHRP49683 370 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 ZNF140P52738 457 aaPredicted RBP14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 EIF3EP60228 445 aaKnown RBP14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 ACY1Q03154 408 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 CDC20Q12834 499 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 RPA4Q13156 261 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 PARP6Q2NL67 630 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 CCDC181Q5TID7 509 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 CACHD1Q5VU97 1274 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 KCTD11Q693B1 232 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 CAPRIN2Q6IMN6 1127 aaKnown RBP14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 DENND5AQ6IQ26 1287 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 C6orf15Q6UXA7 325 aaPredicted RBP14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 SNX20Q7Z614 316 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 PPP1R3BQ86XI6 285 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 OR4K2Q8NGD2 314 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 APOBEC4Q8WW27 367 aaKnown RBP14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 RSC1A1Q92681 617 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 TGM7Q96PF1 710 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 ULBP3Q9BZM4 244 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 KIR3DX1Q9H7L2 352 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 UGT1A7Q9HAW7 530 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 UGT1A10Q9HAW8 530 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 UGT1A8Q9HAW9 530 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 APMAPQ9HDC9 416 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 PDE7BQ9NP56 450 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 RPS6KL1Q9Y6S9 549 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 COLEC10Q9Y6Z7 277 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 SPTBP11277 2137 aa14.18□□□□□ -0.14
SMARCE1-216ENST00000580419 GOLGA6L9A6NEM1 432 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 CFAP99D6REC4 459 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 PSMD3O43242 534 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 SGTAO43765 313 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 SLC28A2O43868 658 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 WISP1O95388 367 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 ITGALP20701 1170 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 MAPK9P45984 424 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 LEPRP48357 1165 aaKnown RBP14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 DRG2P55039 364 aaKnown RBP14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 POLE2P56282 527 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 NFATC3Q12968 1075 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 KCNAB2Q13303 367 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 KLF1Q13351 362 aaPredicted RBP14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 SEPT7Q16181 437 aaKnown RBP14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 PLA2G4EQ3MJ16 856 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 NXPE1Q8N323 547 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 D2HGDHQ8N465 521 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 UBL4BQ8N7F7 174 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 HM13Q8TCT9 377 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 ALG3Q92685 438 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 LRFN5Q96NI6 719 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 OR6C1Q96RD1 312 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 FICDQ9BVA6 458 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 GPR87Q9BY21 358 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 FRMD8P1Q9BZ68 369 aaPredicted RBP14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 CLMPQ9H6B4 373 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 ASB8Q9H765 288 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 VPS37BQ9H9H4 285 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 ANAPC2Q9UJX6 822 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 PADI1Q9ULC6 663 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 BTRCQ9Y297 605 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 REXO2Q9Y3B8 237 aaKnown RBP14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 PCDHB3Q9Y5E6 796 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 ARL5AQ9Y689 179 aa14.17□□□□□ -0.14
SMARCE1-216ENST00000580419 GRID2IPA4D2P6 1211 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 OR5K3A6NET4 321 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 SOWAHDA6NJG2 315 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 ERI2A8K979 691 aaKnown RBP14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 QSOX1O00391 747 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 KCNN4O15554 427 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 LDB2O43679 373 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 SPAG6O75602 509 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 RASSF9O75901 435 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 CCNYL3P0C7X3 344 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 TCN2P20062 427 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 PSMB4P28070 264 aa14.16□□□□□ -0.14
SMARCE1-216ENST00000580419 AKT1P31749 480 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms