RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 ARMC6Q6NXE6 501 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 TMC3Q7Z5M5 1100 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 C11orf96Q7Z7L8 435 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 AMZ2Q86W34 360 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZADH2Q8N4Q0 377 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZBTB2Q8N680 514 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 BEND7Q8N7W2 519 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 CLEC1AQ8NC01 280 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ST6GALNAC3Q8NDV1 305 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 UBE2Q2Q8WVN8 375 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 CLIP3Q96DZ5 547 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 FER1L6-AS2Q96M78 137 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 BARD1Q99728 777 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 DHRS4Q9BTZ2 278 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 GPR63Q9BZJ6 419 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 FANCLQ9NW38 375 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 HRASLS2Q9NWW9 162 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 SOHLH2Q9NX45 425 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 TRIM10Q9UDY6 481 aa11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 DNMT3AQ9Y6K1 912 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-216ENST00000579853 C9J4A7 227 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MAP3K7O43318 606 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MFSD11O43934 449 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 HLA-DQB2P05538 268 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 CD63P08962 238 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 HBQ1P09105 142 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MSL3P1P0C860 447 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 RORAP35398 523 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 CD86P42081 329 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 TMEM115Q12893 351 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ATP1A4Q13733 1029 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MYBPC3Q14896 1274 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 GPR19Q15760 415 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 RPE65Q16518 533 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 KYNUQ16719 465 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 HADHQ16836 314 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZFYVE27Q5T4F4 411 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 CERS6Q6ZMG9 384 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 NIPA2Q8N8Q9 360 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 SLC38A9Q8NBW4 561 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 GDAP1Q8TB36 358 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 FAM71BQ8TC56 605 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 COG1Q8WTW3 980 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 EID2BQ96D98 161 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 DTLQ9NZJ0 730 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 IP6K2Q9UHH9 426 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 SHOC2Q9UQ13 582 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 WDR37Q9Y2I8 494 aa11.91□□□□□ -0.5
CDK5RAP3-216ENST00000579853 KLHL33A6NCF5 533 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MATN2O00339 956 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MTX2O75431 263 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 TCF4P15884 667 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 CYP2A7P20853 494 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 CDK11BP21127 795 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 PRKAA1Q13131 559 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 RAPSNQ13702 412 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 NCF4Q15080 339 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZDHHC20Q5W0Z9 365 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 NCBP2-AS2Q69YL0 99 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 CCDC70Q6NSX1 233 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 FAM198BQ6UWH4 519 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MAP7D3Q8IWC1 876 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 SYTL1Q8IYJ3 562 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 GALNT16Q8N428 558 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 DTX3LQ8TDB6 740 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZNF830Q96NB3 372 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 RANBP9Q96S59 729 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 SLC7A5P2Q9GIP4 190 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ACTR5Q9H9F9 607 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 MYO1AQ9UBC5 1043 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 SERTAD3Q9UJW9 196 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ZNF711Q9Y462 761 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 SPG11Q96JI7 2443 aa11.9□□□□□ -0.5
CDK5RAP3-216ENST00000579853 ANKRD12Q6UB98 2062 aa11.9□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PEX12O00623 359 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 LRRTM2O43300 516 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CAPN1P07384 714 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 MMP2P08253 660 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 MTHFD1P11586 935 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 BPIP17213 487 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 AGXTP21549 392 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ITGA3P26006 1051 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 GLRBP48167 497 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SLC25A11Q02978 314 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 XRCC4Q13426 336 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 GALNT3Q14435 633 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SSPNQ14714 243 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 PDK2Q15119 407 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ZRSR2Q15696 482 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SLC14A2Q15849 920 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 ASIC2Q16515 512 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 CRB2Q5IJ48 1285 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 DCAF10Q5QP82 559 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 LDLRAP1Q5SW96 308 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 SP5Q6BEB4 398 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 TXNRD3NBQ6F5E7 133 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 Q6ZS92 163 aa11.89□□□□□ -0.51
CDK5RAP3-216ENST00000579853 MRGPREQ86SM8 312 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms