RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 KLF10Q13118 480 aa19.96■□□□□ 0.79
SMG8-203ENST00000578922 ARL13AQ5H913 290 aaPredicted RBP19.96■□□□□ 0.79
SMG8-203ENST00000578922 VWA5B1Q5TIE3 1220 aa19.96■□□□□ 0.79
SMG8-203ENST00000578922 ZDHHC20Q5W0Z9 365 aa19.96■□□□□ 0.79
SMG8-203ENST00000578922 SLC30A9Q6PML9 568 aa19.96■□□□□ 0.79
SMG8-203ENST00000578922 DEFB107AQ8IZN7 70 aa19.96■□□□□ 0.79
SMG8-203ENST00000578922 NKAPQ8N5F7 415 aaKnown RBP19.96■□□□□ 0.79
SMG8-203ENST00000578922 SLC26A7Q8TE54 656 aa19.96■□□□□ 0.79
SMG8-203ENST00000578922 CNDP1Q96KN2 507 aa19.96■□□□□ 0.79
SMG8-203ENST00000578922 DERL2Q9GZP9 239 aa19.96■□□□□ 0.79
SMG8-203ENST00000578922 SUN2Q9UH99 717 aa19.96■□□□□ 0.79
SMG8-203ENST00000578922 MBD1Q9UIS9 605 aaPredicted RBP19.96■□□□□ 0.79
SMG8-203ENST00000578922 POMPQ9Y244 141 aa19.96■□□□□ 0.79
SMG8-203ENST00000578922 DCXO43602 365 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 IPO13O94829 963 aaKnown RBP19.95■□□□□ 0.78
SMG8-203ENST00000578922 TSPAN12O95859 305 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 ADRB3P13945 408 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 RPS3P23396 243 aaKnown RBP eCLIP19.95■□□□□ 0.789e-7■■■■□ 19.6
SMG8-203ENST00000578922 AKT1P31749 480 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 MTTPP55157 894 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 C2orf27AQ580R0 203 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 ZNF648Q5T619 568 aaPredicted RBP19.95■□□□□ 0.78
SMG8-203ENST00000578922 GPRC6AQ5T6X5 926 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 ACAD11Q709F0 780 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 KLHL4Q9C0H6 718 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 DRC3Q9H069 523 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 RNF112Q9ULX5 631 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 ENO4A6NNW6 628 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 K7EQS6 105 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 THRAP10827 490 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 ADSLP30566 484 aaPredicted RBP19.95■□□□□ 0.78
SMG8-203ENST00000578922 TBL3Q12788 808 aaKnown RBP19.95■□□□□ 0.78
SMG8-203ENST00000578922 CUL3Q13618 768 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 SKIV2LQ15477 1246 aaKnown RBP19.95■□□□□ 0.78
SMG8-203ENST00000578922 FBXO48Q5FWF7 155 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 RNF220Q5VTB9 566 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 UGT3A1Q6NUS8 523 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 FRMD7Q6ZUT3 714 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 ZFAND2BQ8WV99 257 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 PYDC1Q8WXC3 89 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 PPP1R16AQ96I34 528 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 TFB2MQ9H5Q4 396 aaKnown RBP19.95■□□□□ 0.78
SMG8-203ENST00000578922 TCF7L2Q9NQB0 619 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 PAPOLBQ9NRJ5 636 aaKnown RBP19.95■□□□□ 0.78
SMG8-203ENST00000578922 LIMD1Q9UGP4 676 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 PRPF19Q9UMS4 504 aaKnown RBP19.95■□□□□ 0.78
SMG8-203ENST00000578922 DHRS7Q9Y394 339 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 RAP2CQ9Y3L5 183 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 PLXNB3Q9ULL4 1909 aa19.95■□□□□ 0.78
SMG8-203ENST00000578922 NCF1BA6NI72 391 aaPredicted RBP19.94■□□□□ 0.78
SMG8-203ENST00000578922 NCF1CA8MVU1 366 aaPredicted RBP19.94■□□□□ 0.78
SMG8-203ENST00000578922 FADS2P1A8MWK0 482 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 SLCO1B7G3V0H7 640 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 SOX1O00570 391 aaPredicted RBP19.94■□□□□ 0.78
SMG8-203ENST00000578922 CASQ2O14958 399 aaPredicted RBP19.94■□□□□ 0.78
SMG8-203ENST00000578922 PEX1O43933 1283 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 PIM1P11309 404 aaPredicted RBP19.94■□□□□ 0.78
SMG8-203ENST00000578922 NCF1P14598 390 aaPredicted RBP19.94■□□□□ 0.78
SMG8-203ENST00000578922 HNRNPLP14866 589 aaKnown RBP eCLIP19.94■□□□□ 0.78
SMG8-203ENST00000578922 NSG1P42857 185 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 PIWIL4Q7Z3Z4 852 aaKnown RBP19.94■□□□□ 0.78
SMG8-203ENST00000578922 TECPR1Q7Z6L1 1165 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 DSG4Q86SJ6 1040 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 KIAA1191Q96A73 305 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 GBP5Q96PP8 586 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 HEBP1Q9NRV9 189 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 PIKFYVEQ9Y2I7 2098 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 SUPT3HB4E1H0 165 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 C1QTNF3-AMACRE9PGA6 284 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 MMP20O60882 483 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 SUPT3HO75486 399 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 POU3F3P20264 500 aaPredicted RBP19.94■□□□□ 0.78
SMG8-203ENST00000578922 PFKFB4Q16877 469 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 ERN2Q76MJ5 926 aaKnown RBP19.94■□□□□ 0.78
SMG8-203ENST00000578922 LSMEM2Q8N112 164 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 GALNT15Q8N3T1 639 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 ULK4Q96C45 1275 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 AP2M1Q96CW1 435 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 ATOH8Q96SQ7 321 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 GAS2L1Q99501 681 aaPredicted RBP19.94■□□□□ 0.78
SMG8-203ENST00000578922 SERPINI1Q99574 410 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 VTI1BQ9UEU0 232 aa19.94■□□□□ 0.78
SMG8-203ENST00000578922 LOC100653049A0A140TA62 436 aa19.93■□□□□ 0.78
SMG8-203ENST00000578922 LRRC14BA6NHZ5 514 aa19.93■□□□□ 0.78
SMG8-203ENST00000578922 MATN2O00339 956 aa19.93■□□□□ 0.78
SMG8-203ENST00000578922 HDAC3O15379 428 aa19.93■□□□□ 0.78
SMG8-203ENST00000578922 KRT34O76011 436 aa19.93■□□□□ 0.78
SMG8-203ENST00000578922 TSPAN8P19075 237 aa19.93■□□□□ 0.78
SMG8-203ENST00000578922 CD9P21926 228 aa19.93■□□□□ 0.78
SMG8-203ENST00000578922 CTHP32929 405 aa19.93■□□□□ 0.78
SMG8-203ENST00000578922 ATP6V0D1P61421 351 aa19.93■□□□□ 0.78
SMG8-203ENST00000578922 CNTN1Q12860 1018 aa19.93■□□□□ 0.78
SMG8-203ENST00000578922 PON2Q15165 354 aa19.93■□□□□ 0.78
SMG8-203ENST00000578922 ZNF284Q2VY69 593 aa19.93■□□□□ 0.78
SMG8-203ENST00000578922 HENMT1Q5T8I9 393 aaKnown RBP19.93■□□□□ 0.78
SMG8-203ENST00000578922 KBTBD6Q86V97 674 aa19.93■□□□□ 0.78
SMG8-203ENST00000578922 PTGR2Q8N8N7 351 aaPredicted RBP19.93■□□□□ 0.78
SMG8-203ENST00000578922 SPDYE1Q8NFV5 336 aaPredicted RBP19.93■□□□□ 0.78
SMG8-203ENST00000578922 STAG3L4Q8TBR4 150 aa19.93■□□□□ 0.78
SMG8-203ENST00000578922 LRCH3Q96II8 777 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms