RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 PPM1DO15297 605 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 INPP4BO15327 924 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 KALRNO60229 2985 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 PSPNO60542 156 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 SOCS5O75159 536 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 EML2O95834 649 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 SERPINC1P01008 464 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 HPXP02790 462 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 FAM228BP0C875 321 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 MYBL1P10243 752 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 CYP2A6P11509 494 aaPredicted RBP6.18□□□□□ -1.42
NUP88-212ENST00000576708 ENDOUP21128 410 aaKnown RBP6.18□□□□□ -1.42
NUP88-212ENST00000576708 CD1CP29017 333 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 HOXC12P31275 282 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 ADCY8P40145 1251 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 GPR1P46091 355 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 ARSEP51690 589 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 CDH6P55285 790 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 CDK3Q00526 305 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 NFKB2Q00653 900 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 DSC2Q02487 901 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 SLC25A11Q02978 314 aaKnown RBP6.18□□□□□ -1.42
NUP88-212ENST00000576708 ITKQ08881 620 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 NIPAL4Q0D2K0 466 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 ILF3Q12906 894 aaKnown RBP eCLIP6.18□□□□□ -1.42
NUP88-212ENST00000576708 KRT81Q14533 505 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 MAP9Q49MG5 647 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 BOLA3Q53S33 107 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 TDRD12Q587J7 1177 aaKnown RBP6.18□□□□□ -1.42
NUP88-212ENST00000576708 ARMC12Q5T9G4 340 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 MARC1Q5VT66 337 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 FOXB2Q5VYV0 432 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 LRRC66Q68CR7 880 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 TECPR1Q7Z6L1 1165 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 LUZP1Q86V48 1076 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 C17orf82Q86X59 251 aaPredicted RBP6.18□□□□□ -1.42
NUP88-212ENST00000576708 NAGSQ8N159 534 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 ATPAF2Q8N5M1 289 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 ANKS4BQ8N8V4 417 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 OR6C4Q8NGE1 309 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 EXTL1Q92935 676 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 ZNF669Q96BR6 464 aaPredicted RBP6.18□□□□□ -1.42
NUP88-212ENST00000576708 RNF31Q96EP0 1072 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 SCRN2Q96FV2 425 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 WBP1Q96G27 269 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 MCCC1Q96RQ3 725 aaPredicted RBP6.18□□□□□ -1.42
NUP88-212ENST00000576708 JMJD8Q96S16 334 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 FUCA2Q9BTY2 467 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 NUP85Q9BW27 656 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 GSDMCQ9BYG8 508 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 MRPL47Q9HD33 250 aaKnown RBP6.18□□□□□ -1.42
NUP88-212ENST00000576708 TMEM9Q9P0T7 183 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 TNFRSF10DQ9UBN6 386 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 GPR160Q9UJ42 338 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 ANAPC7Q9UJX3 599 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 PHTF1Q9UMS5 762 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 CHKBQ9Y259 395 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 SLC17A4Q9Y2C5 497 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 TTLL3Q9Y4R7 772 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 PCDHGA7Q9Y5G6 932 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 RPS6KL1Q9Y6S9 549 aa6.18□□□□□ -1.42
NUP88-212ENST00000576708 TRAV20A0A0B4J274 112 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 IGHV5-10-1A0A0J9YXX1 117 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 A0A1W2PQ67 120 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 FITM1A5D6W6 292 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 CYSRT1A8MQ03 144 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 NOTOA8MTQ0 251 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 B8ZZF3 427 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 J3QKU1 62 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 NVLO15381 856 aaKnown RBP6.17□□□□□ -1.42
NUP88-212ENST00000576708 NUDT21O43809 227 aaKnown RBP6.17□□□□□ -1.42
NUP88-212ENST00000576708 DLX3O60479 287 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 CLDN7O95471 211 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 CPNE6O95741 557 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 PRLP01236 227 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 ATP1A1P05023 1023 aaKnown RBP6.17□□□□□ -1.42
NUP88-212ENST00000576708 CYP1A2P05177 515 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 IVLP07476 585 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 LIPCP11150 499 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 FGF3P11487 239 aaPredicted RBP6.17□□□□□ -1.42
NUP88-212ENST00000576708 RAC2P15153 192 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 PNLIPP16233 465 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 CSF2RBP32927 897 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 HSPA9P38646 679 aaKnown RBP6.17□□□□□ -1.42
NUP88-212ENST00000576708 PBX1P40424 430 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 ACTR1BP42025 376 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 KIR2DL2P43627 348 aaPredicted RBP6.17□□□□□ -1.42
NUP88-212ENST00000576708 ZNF135P52742 658 aaPredicted RBP6.17□□□□□ -1.42
NUP88-212ENST00000576708 GFRA1P56159 465 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 TAS2R40P59535 323 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 ACTR1AP61163 376 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 GBE1Q04446 702 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 GALNT2Q10471 571 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 SLC10A2Q12908 348 aaPredicted RBP6.17□□□□□ -1.42
NUP88-212ENST00000576708 NFATC3Q12968 1075 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 EIF3IQ13347 325 aaKnown RBP6.17□□□□□ -1.42
NUP88-212ENST00000576708 BIRC2Q13490 618 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 DPYSL3Q14195 570 aa6.17□□□□□ -1.42
NUP88-212ENST00000576708 PIGHQ14442 188 aaPredicted RBP6.17□□□□□ -1.42
NUP88-212ENST00000576708 FAM209AQ5JX71 171 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms