RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	NLE1	Q9NVX2	485 aa	Predicted RBP	13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	CFAP20	Q9Y6A4	193 aa	Known RBP	13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	MN1	Q10571	1320 aa	Predicted RBP	13.88	□□□□□ -0.19
EDC4-210	ENST00000575507	UNC13C	Q8NB66	2214 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	IGLV3-16	A0A075B6K0	115 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	TRBV5-4	A0A0C4DH59	114 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	MGAT4D	A6NG13	374 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	MROH6	A6NGR9	719 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	OR51F1	A6NGY5	319 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.87	□□□□□ -0.19
EDC4-210	ENST00000575507		H7C0S8	307 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	CES2	O00748	559 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	CAPN5	O15484	640 aa	Predicted RBP	13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	POLB	P06746	335 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	VCL	P18206	1134 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	PSMA3	P25788	255 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	CASQ1	P31415	396 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	MC4R	P32245	332 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	COL9A2	Q14055	689 aa	Predicted RBP	13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	LONRF2	Q1L5Z9	754 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	P3H1	Q32P28	736 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	BCL7A	Q4VC05	210 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	CCDC38	Q502W7	563 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	SEL1L2	Q5TEA6	688 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	PAPD7	Q5XG87	772 aa	Known RBP	13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	DUS1L	Q6P1R4	473 aa	Known RBP	13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	TIPARP	Q7Z3E1	657 aa	Known RBP	13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	SNX20	Q7Z614	316 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	TRIM48	Q8IWZ4	208 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	OR2L2	Q8NH16	312 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	SLC39A7	Q92504	469 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	CXorf40B	Q96DE9	158 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	PBK	Q96KB5	322 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	LINC00615	Q96LM1	132 aa	Predicted RBP	13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	ZNF778	Q96MU6	729 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	TGM7	Q96PF1	710 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	PPP1R2P1	Q96PQ5	205 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	NRTN	Q99748	197 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	C19orf43	Q9BQ61	176 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	ZCCHC2	Q9C0B9	1178 aa	Known RBP	13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	WWP1	Q9H0M0	922 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	SIDT1	Q9NXL6	827 aa	Known RBP	13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	FAM8A1	Q9UBU6	413 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	CRLS1	Q9UJA2	301 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	SNX12	Q9UMY4	172 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	ZNF148	Q9UQR1	794 aa		13.87	□□□□□ -0.19
EDC4-210	ENST00000575507	ESPN	B1AK53	854 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	ZNF500	O60304	480 aa	Predicted RBP	13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	IFNB1	P01574	187 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	AMD1	P17707	334 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	TCP1	P17987	556 aa	Known RBP	13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	RPL22	P35268	128 aa	Known RBP	13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	HADHA	P40939	763 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	SH3BP2	P78314	561 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	PDE1B	Q01064	536 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	SEPT6	Q14141	434 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	TMEM164	Q5U3C3	297 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	SYT10	Q6XYQ8	523 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	SERPINA9	Q86WD7	417 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	PLXDC1	Q8IUK5	500 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	CFAP206	Q8IYR0	622 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	CLDN19	Q8N6F1	224 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	AVL9	Q8NBF6	648 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	ZNF514	Q96K75	400 aa	Predicted RBP	13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	OSBPL9	Q96SU4	736 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	DDA1	Q9BW61	102 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	SEMA4C	Q9C0C4	833 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	ZMYND15	Q9H091	742 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	EPB41L1	Q9H4G0	881 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	FBXO8	Q9NRD0	319 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	SLC2A6	Q9UGQ3	507 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	PRSS21	Q9Y6M0	314 aa		13.86	□□□□□ -0.19
EDC4-210	ENST00000575507	BPTF	Q12830	3046 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	PSMD3	O43242	534 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	ZNF189	O75820	626 aa	Predicted RBP	13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	SUN1	O94901	812 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	ANKRD34C	P0C6C1	535 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	ATP1B2	P14415	290 aa	Predicted RBP	13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	ITGAL	P20701	1170 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	ACRV1	P26436	265 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	CD82	P27701	267 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	CXCR5	P32302	372 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	HAL	P42357	657 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	KCNJ1	P48048	391 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	PRLHR	P49683	370 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	SEPHS1	P49903	392 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	CYP4F2	P78329	520 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	CCNG2	Q16589	344 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	DBN1	Q16643	649 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	GPR33	Q49SQ1	333 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	ZRANB3	Q5FWF4	1079 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	DCAF12	Q5T6F0	453 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	TAS2R42	Q7RTR8	314 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	STYX	Q8WUJ0	223 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	ULK4	Q96C45	1275 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	RMDN2	Q96LZ7	410 aa		13.85	□□□□□ -0.19
EDC4-210	ENST00000575507	COPS8	Q99627	209 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms