RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 SLC7A5P2Q9GIP4 190 aa8.79□□□□□ -1
SMG6-218ENST00000575454 SOHLH2Q9NX45 425 aa8.79□□□□□ -1
SMG6-218ENST00000575454 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.79□□□□□ -1
SMG6-218ENST00000575454 MYO1AQ9UBC5 1043 aa8.79□□□□□ -1
SMG6-218ENST00000575454 IP6K2Q9UHH9 426 aa8.79□□□□□ -1
SMG6-218ENST00000575454 SERTAD3Q9UJW9 196 aa8.79□□□□□ -1
SMG6-218ENST00000575454 BTRCQ9Y297 605 aa8.79□□□□□ -1
SMG6-218ENST00000575454 WDR37Q9Y2I8 494 aa8.79□□□□□ -1
SMG6-218ENST00000575454 LRRK1Q38SD2 2015 aa8.79□□□□□ -1
SMG6-218ENST00000575454 LRP4O75096 1905 aa8.79□□□□□ -1
SMG6-218ENST00000575454 CHD5Q8TDI0 1954 aa8.79□□□□□ -1
SMG6-218ENST00000575454 MATN2O00339 956 aa8.78□□□□□ -1
SMG6-218ENST00000575454 MFSD11O43934 449 aa8.78□□□□□ -1
SMG6-218ENST00000575454 MTX2O75431 263 aa8.78□□□□□ -1
SMG6-218ENST00000575454 POP7O75817 140 aaKnown RBP8.78□□□□□ -1
SMG6-218ENST00000575454 HLA-DQB2P05538 268 aa8.78□□□□□ -1
SMG6-218ENST00000575454 MSL3P1P0C860 447 aa8.78□□□□□ -1
SMG6-218ENST00000575454 PYGMP11217 842 aa8.78□□□□□ -1
SMG6-218ENST00000575454 CYP2A7P20853 494 aa8.78□□□□□ -1
SMG6-218ENST00000575454 ITGA3P26006 1051 aa8.78□□□□□ -1
SMG6-218ENST00000575454 RORAP35398 523 aa8.78□□□□□ -1
SMG6-218ENST00000575454 PPP1CAP62136 330 aa8.78□□□□□ -1
SMG6-218ENST00000575454 PRKAA1Q13131 559 aa8.78□□□□□ -1
SMG6-218ENST00000575454 XRCC4Q13426 336 aa8.78□□□□□ -1
SMG6-218ENST00000575454 SSPNQ14714 243 aa8.78□□□□□ -1
SMG6-218ENST00000575454 MYBPC3Q14896 1274 aa8.78□□□□□ -1
SMG6-218ENST00000575454 NCF4Q15080 339 aa8.78□□□□□ -1
SMG6-218ENST00000575454 PDK2Q15119 407 aa8.78□□□□□ -1
SMG6-218ENST00000575454 GPR19Q15760 415 aa8.78□□□□□ -1
SMG6-218ENST00000575454 ASIC2Q16515 512 aa8.78□□□□□ -1
SMG6-218ENST00000575454 C11orf96Q7Z7L8 435 aa8.78□□□□□ -1
SMG6-218ENST00000575454 SLC38A9Q8NBW4 561 aa8.78□□□□□ -1
SMG6-218ENST00000575454 FAM71BQ8TC56 605 aa8.78□□□□□ -1
SMG6-218ENST00000575454 UBE2Q2Q8WVN8 375 aa8.78□□□□□ -1
SMG6-218ENST00000575454 EID2BQ96D98 161 aa8.78□□□□□ -1
SMG6-218ENST00000575454 ZNF670Q9BS34 389 aa8.78□□□□□ -1
SMG6-218ENST00000575454 HAUS4Q9H6D7 363 aa8.78□□□□□ -1
SMG6-218ENST00000575454 ACTR5Q9H9F9 607 aaPredicted RBP8.78□□□□□ -1
SMG6-218ENST00000575454 IMP3Q9NV31 184 aaKnown RBP8.78□□□□□ -1
SMG6-218ENST00000575454 ACSL5Q9ULC5 683 aa8.78□□□□□ -1
SMG6-218ENST00000575454 SHOC2Q9UQ13 582 aa8.78□□□□□ -1
SMG6-218ENST00000575454 COLEC10Q9Y6Z7 277 aa8.78□□□□□ -1
SMG6-218ENST00000575454 AKAP9Q99996 3911 aa8.78□□□□□ -1
SMG6-218ENST00000575454 OR6C74A6NCV1 312 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 MYO1FO00160 1098 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 LRRTM2O43300 516 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 SLC4A1P02730 911 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 MMP2P08253 660 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 MTHFD1P11586 935 aaKnown RBP8.77□□□□□ -1.01
SMG6-218ENST00000575454 TCF4P15884 667 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 BPIP17213 487 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 NDUFS1P28331 727 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 SSR1P43307 286 aaKnown RBP8.77□□□□□ -1.01
SMG6-218ENST00000575454 PREPP48147 710 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 GLRBP48167 497 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 SOX8P57073 446 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 IFI35P80217 286 aaPredicted RBP8.77□□□□□ -1.01
SMG6-218ENST00000575454 MYL5Q02045 173 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 SLC25A11Q02978 314 aaKnown RBP8.77□□□□□ -1.01
SMG6-218ENST00000575454 RAPSNQ13702 412 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 ATP1A4Q13733 1029 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 GALNT3Q14435 633 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 ZRSR2Q15696 482 aaKnown RBP8.77□□□□□ -1.01
SMG6-218ENST00000575454 LONRF2Q1L5Z9 754 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 CRB2Q5IJ48 1285 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 LDLRAP1Q5SW96 308 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 NCBP2-AS2Q69YL0 99 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 SP5Q6BEB4 398 aaPredicted RBP8.77□□□□□ -1.01
SMG6-218ENST00000575454 FAM198BQ6UWH4 519 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 CERS6Q6ZMG9 384 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 Q6ZS92 163 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 ZNF571Q7Z3V5 609 aaPredicted RBP8.77□□□□□ -1.01
SMG6-218ENST00000575454 MRGPREQ86SM8 312 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 NT5DC3Q86UY8 548 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 SYTL1Q8IYJ3 562 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 GALNT16Q8N428 558 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 TTC30BQ8N4P2 665 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 KCTD6Q8NC69 237 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 NACC2Q96BF6 587 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 HDAC11Q96DB2 347 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 AGAP3Q96P47 875 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 TRIB3Q96RU7 358 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 ISCUQ9H1K1 167 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 TRABDQ9H4I3 376 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 CBX8Q9HC52 389 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 C1GALT1Q9NS00 363 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 PCMTD2Q9NV79 361 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 DTLQ9NZJ0 730 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 AIPL1Q9NZN9 384 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 ZNF711Q9Y462 761 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 PCDHGA10Q9Y5H3 936 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 HEBP2Q9Y5Z4 205 aa8.77□□□□□ -1.01
SMG6-218ENST00000575454 A0A1B0GUH1 482 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 ARHGAP10A1A4S6 786 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 SLC9B1P1A6NJY1 282 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 LRRC53A6NM62 1247 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 E7EQ34 232 aa8.76□□□□□ -1.01
SMG6-218ENST00000575454 F5H423 210 aaPredicted RBP8.76□□□□□ -1.01
SMG6-218ENST00000575454 DDX3XO00571 662 aaKnown RBP eCLIP8.76□□□□□ -1.01
SMG6-218ENST00000575454 CAPN1P07384 714 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms