RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 AVILO75366 819 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 AP2A2O94973 939 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 POLBP06746 335 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 SLC35G4P0C7Q5 338 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 HOXB3P14651 431 aaPredicted RBP20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 NMBRP28336 390 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 RBMS1P29558 406 aaKnown RBP20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 PAFAH1B1P43034 410 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 CFHR1Q03591 330 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 SQSTM1Q13501 440 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 RPE65Q16518 533 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 PACS1Q6VY07 963 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 CERS6Q6ZMG9 384 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 ZNF574Q6ZN55 896 aaPredicted RBP20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 RBM12BQ8IXT5 1001 aaKnown RBP20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 CFAP206Q8IYR0 622 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 OR4D9Q8NGE8 314 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 NCSTNQ92542 709 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 CCDC74BQ96LY2 380 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 CCM2Q9BSQ5 444 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 WWP1Q9H0M0 922 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 UCK1Q9HA47 277 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 MRM3Q9HC36 420 aaKnown RBP20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 TREX1Q9NSU2 369 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 IMP3Q9NV31 184 aaKnown RBP20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 LOXL2Q9Y4K0 774 aa20.29■□□□□ 0.84
HCFC1R1-208ENST00000575214 PRAMEF33A0A0G2JMD5 474 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 IGHV5-10-1A0A0J9YXX1 117 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 ZZEF1O43149 2961 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 DXOO77932 396 aaKnown RBP20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 MPSTP25325 297 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 PPARGP37231 505 aaPredicted RBP20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 LIMK2P53671 638 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 TBC1D25Q3MII6 688 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 AARS2Q5JTZ9 985 aaKnown RBP20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 CASC4Q6P4E1 433 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 TMEM71Q6P5X7 295 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 CAND1Q86VP6 1230 aaKnown RBP20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 KLHL7Q8IXQ5 586 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 LILRA3Q8N6C8 439 aaPredicted RBP20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 MCUQ8NE86 351 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 SGSM3Q96HU1 749 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 C12orf66Q96MD2 445 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 CMKLR1Q99788 373 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 KIFC1Q9BW19 673 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 EPB41L1Q9H4G0 881 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 XAB2Q9HCS7 855 aaKnown RBP20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 SLC40A1Q9NP59 571 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 CATSPERZQ9NTU4 200 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 AKAP7Q9P0M2 348 aaPredicted RBP20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 TMEM9Q9P0T7 183 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 SAMD15Q9P1V8 674 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 PCYOX1Q9UHG3 505 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 SOX13Q9UN79 622 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 CFAP20Q9Y6A4 193 aaKnown RBP20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 PRSS21Q9Y6M0 314 aa20.28■□□□□ 0.84
HCFC1R1-208ENST00000575214 C17orf113A0A1B0GUU1 675 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 QSOX1O00391 747 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 TLX3O43711 291 aaPredicted RBP20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 TNFSF15O95150 251 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 JMJD7P0C870 316 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 MLNP12872 115 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 HGFP14210 728 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 PTK6Q13882 451 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 GPR18Q14330 331 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 CES3Q6UWW8 571 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 PPIL6Q8IXY8 311 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 MPP5Q8N3R9 675 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 OTUD6BQ8N6M0 293 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 RCBTB1Q8NDN9 531 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 GPR150Q8NGU9 434 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 TMEM159Q96B96 161 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 MFSD3Q96ES6 412 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 PRR11Q96HE9 360 aaPredicted RBP20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 ZNF578Q96N58 590 aaPredicted RBP20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 RUNDC3BQ96NL0 473 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 SLC46A1Q96NT5 459 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 SERPINB12Q96P63 405 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 COG4Q9H9E3 785 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 THSD1Q9NS62 852 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 RNF14Q9UBS8 474 aa20.27■□□□□ 0.84
HCFC1R1-208ENST00000575214 OR1I1O60431 355 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 UBXN7O94888 489 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 OR56A5P0C7T3 313 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 THRAP10827 490 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 MTHFD1P11586 935 aaKnown RBP20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 TYRP1P17643 537 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 AMD1P17707 334 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 TRA2AQ13595 282 aaKnown RBP eCLIP20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 SEMA3AQ14563 771 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 C16orf72Q14CZ0 275 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 SNAP47Q5SQN1 464 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 WDR74Q6RFH5 385 aaPredicted RBP20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 IGF2-ASQ6U949 168 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 XKR5Q6UX68 686 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 NAT8LQ8N9F0 302 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 SPDYE1Q8NFV5 336 aaPredicted RBP20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 FGF11Q92914 225 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 SLCO2A1Q92959 643 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 RMDN2Q96LZ7 410 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms