RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 P2RY12Q9H244 342 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 COG4Q9H9E3 785 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 MRM3Q9HC36 420 aaKnown RBP8.5□□□□□ -1.05
SMG6-216ENST00000575176 CHRAC1Q9NRG0 131 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 POT1Q9NUX5 634 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 FOXJ2Q9P0K8 574 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 SEMA5BQ9P283 1151 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 MED16Q9Y2X0 877 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 DNMT3AQ9Y6K1 912 aaPredicted RBP8.5□□□□□ -1.05
SMG6-216ENST00000575176 GCN1Q92616 2671 aaKnown RBP8.49□□□□□ -1.05
SMG6-216ENST00000575176 NUP210LQ5VU65 1888 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 TENM4Q6N022 2769 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 ZCWPW2A0A1B0GU75 182 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 SLC5A10A0PJK1 596 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 KIF5CO60282 957 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 SNX2O60749 519 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 KRT14P02533 472 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 PTMAP06454 111 aaKnown RBP8.49□□□□□ -1.05
SMG6-216ENST00000575176 F7P08709 466 aaPredicted RBP8.49□□□□□ -1.05
SMG6-216ENST00000575176 ANKRD34CP0C6C1 535 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 SPTBP11277 2137 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 MTHFD1P11586 935 aaKnown RBP8.49□□□□□ -1.05
SMG6-216ENST00000575176 CCL4P13236 92 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 ATP1B2P14415 290 aaPredicted RBP8.49□□□□□ -1.05
SMG6-216ENST00000575176 MGAT1P26572 445 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 ITPKBP27987 946 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 PDHA2P29803 388 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 VPS41P49754 854 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 GPLD1P80108 840 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 BASP1P80723 227 aaKnown RBP8.49□□□□□ -1.05
SMG6-216ENST00000575176 CDK16Q00536 496 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 PTK6Q13882 451 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 GBX1Q14549 363 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 ITIH4Q14624 930 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 TYSND1Q2T9J0 566 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 WDR74Q6RFH5 385 aaPredicted RBP8.49□□□□□ -1.05
SMG6-216ENST00000575176 AFTPHQ6ULP2 937 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 LDB1Q86U70 411 aaPredicted RBP8.49□□□□□ -1.05
SMG6-216ENST00000575176 AMZ2Q86W34 360 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 WDR36Q8NI36 951 aaKnown RBP8.49□□□□□ -1.05
SMG6-216ENST00000575176 HDAC10Q969S8 669 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 ZNF514Q96K75 400 aaPredicted RBP8.49□□□□□ -1.05
SMG6-216ENST00000575176 SIGLEC10Q96LC7 697 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 FCRL3Q96P31 734 aaPredicted RBP8.49□□□□□ -1.05
SMG6-216ENST00000575176 COPS8Q99627 209 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 SPRY4Q9C004 299 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 WWP1Q9H0M0 922 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 OSGEPL1Q9H4B0 414 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 HOMER3Q9NSC5 361 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 PCYOX1Q9UHG3 505 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 CRLS1Q9UJA2 301 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 SOX13Q9UN79 622 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 LOXL2Q9Y4K0 774 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 PCDHGA7Q9Y5G6 932 aa8.49□□□□□ -1.05
SMG6-216ENST00000575176 PCM1Q15154 2024 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 C17orf113A0A1B0GUU1 675 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 OR5K4A6NMS3 321 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 RHPN2P1A8MT19 583 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 BHMG1C9JSJ3 638 aaPredicted RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 PLD2O14939 933 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 HGSO14964 777 aaPredicted RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 NRDCO43847 1150 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 KCNJ13O60928 360 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 FGF3P11487 239 aaPredicted RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 MLNP12872 115 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 TCP1P17987 556 aaKnown RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 MSH3P20585 1137 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 MPSTP25325 297 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 ACADLP28330 430 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 ALDH4A1P30038 563 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 PBLDP30039 288 aaPredicted RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 AKT1P31749 480 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 MLLT3P42568 568 aaPredicted RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 TNNT3P45378 269 aaPredicted RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 PREPP48147 710 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 LEPRP48357 1165 aaKnown RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 SESN2P58004 480 aaPredicted RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 ERVPABLB-1P60509 514 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 TLE3Q04726 772 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 CCDC173Q0VFZ6 552 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 GPS1Q13098 491 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 SRSF6Q13247 344 aaKnown RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 EIF3IQ13347 325 aaKnown RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 GRB7Q14451 532 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 AMZ1Q400G9 498 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 MAP9Q49MG5 647 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 MSS51Q4VC12 460 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 ZNF789Q5FWF6 425 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 PCID2Q5JVF3 399 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 CTSL3PQ5NE16 218 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 KIAA0930Q6ICG6 404 aaPredicted RBP8.48□□□□□ -1.05
SMG6-216ENST00000575176 TMEM71Q6P5X7 295 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 CES3Q6UWW8 571 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 C4orf22Q6V702 233 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 PPP1R21Q6ZMI0 780 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 USP53Q70EK8 1073 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 RAB11FIP2Q7L804 512 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 TMEM135Q86UB9 458 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 DTX1Q86Y01 620 aa8.48□□□□□ -1.05
SMG6-216ENST00000575176 VRK3Q8IV63 474 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms