RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 PATE1Q8WXA2 126 aa32.51■■■□□ 2.79
CTDNEP1-209ENST00000574205 TSPYL1Q9H0U9 437 aa32.51■■■□□ 2.79
CTDNEP1-209ENST00000574205 PPANQ9NQ55 473 aaKnown RBP32.51■■■□□ 2.79
CTDNEP1-209ENST00000574205 OR5K4A6NMS3 321 aa32.5■■■□□ 2.79
CTDNEP1-209ENST00000574205 PDZK1P1A8MUH7 402 aa32.5■■■□□ 2.79
CTDNEP1-209ENST00000574205 RPL10P27635 214 aaKnown RBP32.5■■■□□ 2.79
CTDNEP1-209ENST00000574205 AGAP9Q5VTM2 703 aa32.5■■■□□ 2.79
CTDNEP1-209ENST00000574205 TRMT10BQ6PF06 316 aaKnown RBP32.5■■■□□ 2.79
CTDNEP1-209ENST00000574205 IYDQ6PHW0 289 aa32.5■■■□□ 2.79
CTDNEP1-209ENST00000574205 ABRAXAS1Q6UWZ7 409 aa32.5■■■□□ 2.79
CTDNEP1-209ENST00000574205 FAM83HQ6ZRV2 1179 aaPredicted RBP32.5■■■□□ 2.79
CTDNEP1-209ENST00000574205 SFRP1Q8N474 314 aa32.5■■■□□ 2.79
CTDNEP1-209ENST00000574205 NAT6Q93015 286 aa32.5■■■□□ 2.79
CTDNEP1-209ENST00000574205 TSSK1BQ9BXA7 367 aa32.5■■■□□ 2.79
CTDNEP1-209ENST00000574205 FBXO5Q9UKT4 447 aa32.5■■■□□ 2.79
CTDNEP1-209ENST00000574205 ACSL5Q9ULC5 683 aa32.5■■■□□ 2.79
CTDNEP1-209ENST00000574205 PCDHB1Q9Y5F3 818 aa32.5■■■□□ 2.79
CTDNEP1-209ENST00000574205 S1PR4O95977 384 aa32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 KCNA4P22459 653 aa32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 ECHS1P30084 290 aa32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 MAGEA4P43358 317 aa32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 CARSP49589 748 aaKnown RBP32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 EIF3BP55884 814 aaKnown RBP32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 SEPT7Q16181 437 aaKnown RBP32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 PPM1JQ5JR12 505 aa32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 TEX35Q5T0J7 233 aa32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 GUSBP11Q6P575 273 aa32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 FMO2Q99518 471 aa32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 MOCS1Q9NZB8 636 aa32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 FAM8A1Q9UBU6 413 aa32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 CRYL1Q9Y2S2 319 aa32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 PCDHGA1Q9Y5H4 931 aa32.49■■■□□ 2.79
CTDNEP1-209ENST00000574205 KIR2DS5A0A0G2JLQ3 304 aa32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 A0A0G2JNG1 304 aa32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 KIR2DS3K7RE56 304 aa32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 ILKQ13418 452 aa32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 KIR2DS5Q14953 304 aa32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 ZNF658BQ4V348 819 aaPredicted RBP32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 PTRHD1Q6GMV3 140 aaKnown RBP32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 CFAP206Q8IYR0 622 aa32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 ARL14Q8N4G2 192 aa32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 C2CD4AQ8NCU7 369 aaPredicted RBP32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 MAPK15Q8TD08 544 aa32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 C9orf72Q96LT7 481 aa32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 BIRC8Q96P09 236 aa32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 COG4Q9H9E3 785 aa32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 APOBEC2Q9Y235 224 aaKnown RBP32.48■■■□□ 2.79
CTDNEP1-209ENST00000574205 ASXL3Q9C0F0 2248 aa32.47■■■□□ 2.79
CTDNEP1-209ENST00000574205 CPED1A4D0V7 1026 aa32.47■■■□□ 2.79
CTDNEP1-209ENST00000574205 NUDT21O43809 227 aaKnown RBP32.47■■■□□ 2.79
CTDNEP1-209ENST00000574205 ESR1P03372 595 aa32.47■■■□□ 2.79
CTDNEP1-209ENST00000574205 GP1BAP07359 652 aa32.47■■■□□ 2.79
CTDNEP1-209ENST00000574205 FTH1P19P0C7X4 201 aa32.47■■■□□ 2.79
CTDNEP1-209ENST00000574205 GLB1P16278 677 aa32.47■■■□□ 2.79
CTDNEP1-209ENST00000574205 MAZP56270 477 aaKnown RBP32.47■■■□□ 2.79
CTDNEP1-209ENST00000574205 ZNF789Q5FWF6 425 aa32.47■■■□□ 2.79
CTDNEP1-209ENST00000574205 XKR5Q6UX68 686 aa32.47■■■□□ 2.79
CTDNEP1-209ENST00000574205 KIAA0408Q6ZU52 694 aa32.47■■■□□ 2.79
CTDNEP1-209ENST00000574205 SLC37A2Q8TED4 501 aa32.47■■■□□ 2.79
CTDNEP1-209ENST00000574205 PANX3Q96QZ0 392 aa32.47■■■□□ 2.79
CTDNEP1-209ENST00000574205 FBXO6Q9NRD1 293 aaPredicted RBP32.47■■■□□ 2.79
CTDNEP1-209ENST00000574205 GSTA2P09210 222 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 BRAFP15056 766 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 SSTR1P30872 391 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 FASLGP48023 281 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 TEDDM1Q5T9Z0 273 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 CAPN12Q6ZSI9 719 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 LILRA3Q8N6C8 439 aaPredicted RBP32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 IFI44Q8TCB0 444 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 ELMO1Q92556 727 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 RP1P56715 2156 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 H3BMM5 538 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 LIN7AO14910 233 aaPredicted RBP32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 RFPL3O75679 317 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 SLU7O95391 586 aaKnown RBP32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 HALP42357 657 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 LEPRP48357 1165 aaKnown RBP32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 MGAT5Q09328 741 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 RPA4Q13156 261 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 CTSL3PQ5NE16 218 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 C3orf62Q6ZUJ4 267 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 EFL1Q7Z2Z2 1120 aaKnown RBP32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 DGLUCYQ7Z3D6 616 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 GALNT7Q86SF2 657 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 SCHIP1Q9P0W5 487 aaPredicted RBP32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 ZFATQ9P243 1243 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 WDR37Q9Y2I8 494 aa32.46■■■□□ 2.79
CTDNEP1-209ENST00000574205 IQCF5A8MTL0 148 aa32.45■■■□□ 2.78
CTDNEP1-209ENST00000574205 DKK1O94907 266 aa32.45■■■□□ 2.78
CTDNEP1-209ENST00000574205 FMO4P31512 558 aa32.45■■■□□ 2.78
CTDNEP1-209ENST00000574205 TUBB4BP68371 445 aa32.45■■■□□ 2.78
CTDNEP1-209ENST00000574205 MPP1Q00013 466 aa32.45■■■□□ 2.78
CTDNEP1-209ENST00000574205 BIRC2Q13490 618 aa32.45■■■□□ 2.78
CTDNEP1-209ENST00000574205 ZNF449Q6P9G9 518 aa32.45■■■□□ 2.78
CTDNEP1-209ENST00000574205 CYS1Q717R9 158 aa32.45■■■□□ 2.78
CTDNEP1-209ENST00000574205 SLC9B2Q86UD5 537 aa32.45■■■□□ 2.78
CTDNEP1-209ENST00000574205 SLCO6A1Q86UG4 719 aa32.45■■■□□ 2.78
CTDNEP1-209ENST00000574205 RELL1Q8IUW5 271 aa32.45■■■□□ 2.78
CTDNEP1-209ENST00000574205 AVL9Q8NBF6 648 aa32.45■■■□□ 2.78
CTDNEP1-209ENST00000574205 STN1Q9H668 368 aaKnown RBP32.45■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms