RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 LRRN4CLQ8ND94 238 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 GPR150Q8NGU9 434 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 OR2L2Q8NH16 312 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 CALML6Q8TD86 181 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 SH3KBP1Q96B97 665 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 ZNF669Q96BR6 464 aaPredicted RBP10.84□□□□□ -0.67
CHD3-216ENST00000573936 TCF12Q99081 682 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 EBNA1BP2Q99848 306 aaKnown RBP10.84□□□□□ -0.67
CHD3-216ENST00000573936 CCM2Q9BSQ5 444 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 TSSK1BQ9BXA7 367 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 ABCG4Q9H172 646 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 WASH6PQ9NQA3 447 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 LRIT1Q9P2V4 623 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 TBC1D29Q9UFV1 150 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 SLC23A2Q9UGH3 650 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 ACSL5Q9ULC5 683 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 VPS9D1Q9Y2B5 631 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 DNAJC16Q9Y2G8 782 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 RPS6KL1Q9Y6S9 549 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 FAM169AQ9Y6X4 670 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 U3KQA8 63 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 ZNF106Q9H2Y7 1883 aaKnown RBP10.84□□□□□ -0.67
CHD3-216ENST00000573936 EIF3HO15372 352 aaKnown RBP eCLIP10.83□□□□□ -0.685e-6■■■□□ 14.9
CHD3-216ENST00000573936 PRSS56P0CW18 603 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 MYF5P13349 255 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 F3P13726 295 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 OGNP20774 298 aaKnown RBP10.83□□□□□ -0.68
CHD3-216ENST00000573936 ARCN1P48444 511 aaKnown RBP10.83□□□□□ -0.68
CHD3-216ENST00000573936 PLOD1Q02809 727 aaPredicted RBP10.83□□□□□ -0.68
CHD3-216ENST00000573936 C19orf57Q0VDD7 668 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 CBLBQ13191 982 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 LONRF1Q17RB8 773 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 CCDC157Q569K6 752 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 SPANXN3Q5MJ09 141 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 ABRAXAS1Q6UWZ7 409 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 CENPUQ71F23 418 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 TMPRSS12Q86WS5 348 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 LRRC6Q86X45 466 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 CACTIN-AS1Q8N1I8 211 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 SFRP1Q8N474 314 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 ARL14Q8N4G2 192 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.83□□□□□ -0.68
CHD3-216ENST00000573936 HM13Q8TCT9 377 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 FCRL3Q96P31 734 aaPredicted RBP10.83□□□□□ -0.68
CHD3-216ENST00000573936 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.83□□□□□ -0.68
CHD3-216ENST00000573936 DPH5Q9H2P9 285 aa10.83□□□□□ -0.68
CHD3-216ENST00000573936 TDRD6O60522 2096 aaKnown RBP10.83□□□□□ -0.68
CHD3-216ENST00000573936 ZCWPW2A0A1B0GU75 182 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 A6NCN8 305 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 PRR19A6NJB7 356 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 PDZK1P1A8MUH7 402 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 PRMT5O14744 637 aaPredicted RBP10.82□□□□□ -0.68
CHD3-216ENST00000573936 SGTAO43765 313 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 XRCC1P18887 633 aaPredicted RBP10.82□□□□□ -0.68
CHD3-216ENST00000573936 RPS3P23396 243 aaKnown RBP eCLIP10.82□□□□□ -0.68
CHD3-216ENST00000573936 ARNTP27540 789 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 PBLDP30039 288 aaPredicted RBP10.82□□□□□ -0.68
CHD3-216ENST00000573936 ELK3P41970 407 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 GPR3P46089 330 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 FASLGP48023 281 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 MAZP56270 477 aaKnown RBP10.82□□□□□ -0.68
CHD3-216ENST00000573936 MRPS25P82663 173 aaKnown RBP10.82□□□□□ -0.68
CHD3-216ENST00000573936 CYP4F3Q08477 520 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 RPA4Q13156 261 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 METRNLQ641Q3 311 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 NEPROQ6NW34 567 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 DHRS13Q6UX07 377 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 TRIM48Q8IWZ4 208 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 RBM12BQ8IXT5 1001 aaKnown RBP10.82□□□□□ -0.68
CHD3-216ENST00000573936 CFAP206Q8IYR0 622 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 NOA1Q8NC60 698 aaKnown RBP10.82□□□□□ -0.68
CHD3-216ENST00000573936 ART4Q93070 314 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 CCDC74AQ96AQ1 378 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 CCDC3Q9BQI4 270 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 FAM167BQ9BTA0 163 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 LRRC1Q9BTT6 524 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 FAM129AQ9BZQ8 928 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 FOXP3Q9BZS1 431 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 PHACTR1Q9C0D0 580 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 SARS2Q9NP81 518 aaKnown RBP10.82□□□□□ -0.68
CHD3-216ENST00000573936 PRDM8Q9NQV8 689 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 C20orf96Q9NUD7 363 aaPredicted RBP10.82□□□□□ -0.68
CHD3-216ENST00000573936 INTS10Q9NVR2 710 aaKnown RBP10.82□□□□□ -0.68
CHD3-216ENST00000573936 GNPTGQ9UJJ9 305 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 RNF215Q9Y6U7 377 aa10.82□□□□□ -0.68
CHD3-216ENST00000573936 TRBV23OR9-2A0A075B6M9 112 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 TRABD2BA6NFA1 517 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 E7ESA3 106 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 H3BMM5 538 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 LIN7AO14910 233 aaPredicted RBP10.81□□□□□ -0.68
CHD3-216ENST00000573936 KPNA5O15131 536 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 OPA1O60313 960 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 TCEA3O75764 348 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 ZIC2O95409 532 aaPredicted RBP10.81□□□□□ -0.68
CHD3-216ENST00000573936 VIPP01282 170 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 ADARP55265 1226 aaKnown RBP10.81□□□□□ -0.68
CHD3-216ENST00000573936 HHEXQ03014 270 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 PDIA2Q13087 525 aaKnown RBP10.81□□□□□ -0.68
CHD3-216ENST00000573936 NFE2L1Q14494 772 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 SEMA3AQ14563 771 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms