RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 RGRP47804 291 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 IST1P53990 364 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 TPD52P55327 224 aaPredicted RBP15.43■□□□□ 0.06
NUP88-207ENST00000573584 GNA12Q03113 381 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 TAF10Q12962 218 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 PWP1Q13610 501 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 ATP1A4Q13733 1029 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 PLA2G4EQ3MJ16 856 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 TTC23Q5W5X9 447 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 GRAMD4Q6IC98 578 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 GALNT18Q6P9A2 607 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 ZNF280BQ86YH2 543 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 FAM86B1Q8N7N1 296 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 OR7D4Q8NG98 312 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 ZNF583Q96ND8 569 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 SMURF2Q9HAU4 748 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 LTB4R2Q9NPC1 389 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 SEPT3Q9UH03 358 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 DOLKQ9UPQ8 538 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 PCDHGA8Q9Y5G5 932 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 CORINQ9Y5Q5 1042 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 C16orf96A6NNT2 1141 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 AKR1A1P14550 325 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 TACR2P21452 398 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 MC4RP32245 332 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 TTPAP49638 278 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 CCR3P51677 355 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 NR1D2Q14995 579 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 SKIV2LQ15477 1246 aaKnown RBP15.42■□□□□ 0.06
NUP88-207ENST00000573584 IMPG1Q17R60 797 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 AP5B1Q2VPB7 878 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 CTSL3PQ5NE16 218 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 SULT1C3Q6IMI6 304 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 LGI2Q8N0V4 545 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 SPARTQ8N0X7 666 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 FBXO30Q8TB52 745 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 SLC22A17Q8WUG5 538 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 TRUB1Q8WWH5 349 aaKnown RBP15.42■□□□□ 0.06
NUP88-207ENST00000573584 CSF3RQ99062 836 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 BEGAINQ9BUH8 593 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 CINPQ9BW66 212 aaPredicted RBP15.42■□□□□ 0.06
NUP88-207ENST00000573584 UGT2B28Q9BY64 529 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 GPN2Q9H9Y4 310 aaPredicted RBP15.42■□□□□ 0.06
NUP88-207ENST00000573584 OLA1Q9NTK5 396 aaKnown RBP15.42■□□□□ 0.06
NUP88-207ENST00000573584 FAM118AQ9NWS6 357 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 SMPD4Q9NXE4 827 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 FKBPLQ9UIM3 349 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 PCDHB5Q9Y5E4 795 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 E5RI56 91 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 PFDN6O15212 129 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 GSTA4O15217 222 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 GSTM2P28161 218 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 PLA2G16P53816 162 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 CBX3Q13185 183 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 RFTN2Q52LD8 501 aaPredicted RBP15.42■□□□□ 0.06
NUP88-207ENST00000573584 ZRANB3Q5FWF4 1079 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 SPRYD7Q5W111 196 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 GTF2IRD2BQ6EKJ0 949 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 GTF2IRD2Q86UP8 949 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 OR2T12Q8NG77 320 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 PSKH2Q96QS6 385 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 CARS2Q9HA77 564 aaKnown RBP15.42■□□□□ 0.06
NUP88-207ENST00000573584 BPIFA1Q9NP55 256 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 PALMDQ9NP74 551 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 TLR8Q9NR97 1041 aaKnown RBP15.42■□□□□ 0.06
NUP88-207ENST00000573584 VAPAQ9P0L0 249 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 WARS2Q9UGM6 360 aaKnown RBP15.42■□□□□ 0.06
NUP88-207ENST00000573584 GNPTGQ9UJJ9 305 aa15.42■□□□□ 0.06
NUP88-207ENST00000573584 POLR3HQ9Y535 204 aaPredicted RBP15.42■□□□□ 0.06
NUP88-207ENST00000573584 FUOMA2VDF0 154 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 K7EPI3 171 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 LSM1O15116 133 aaKnown RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 NOBOXO60393 691 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 KATNA1O75449 491 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 CLPXO76031 633 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 HPRP00739 348 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 CST1P01037 141 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 IGLV3-27P01718 113 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 PORP16435 677 aaPredicted RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 LPOP22079 712 aaPredicted RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 HOXD9P28356 352 aaPredicted RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 SFSWAPQ12872 951 aaKnown RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 C18orf21Q32NC0 220 aaPredicted RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 ENPP6Q6UWR7 440 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 AADATQ8N5Z0 425 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 ZBTB8BQ8NAP8 495 aaPredicted RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 LPCAT1Q8NF37 534 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 OR8J3Q8NGG0 315 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 HDAC2Q92769 488 aaKnown RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 MAGED4Q96JG8 741 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 B3GALT6Q96L58 329 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 THUMPD3Q9BV44 507 aaKnown RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 LIMD1Q9UGP4 676 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 TSR3Q9UJK0 312 aaKnown RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 F5H5T6 163 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 IFRD1O00458 451 aaPredicted RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 ANKRD28O15084 1053 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 INSIG1O15503 277 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 TBC1D4O60343 1298 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 DFNA5O60443 496 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms