RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 AKAP7Q9P0M2 348 aaPredicted RBP20.26■□□□□ 0.83
CHMP6-204ENST00000572778 TMEM9Q9P0T7 183 aa20.26■□□□□ 0.83
CHMP6-204ENST00000572778 ANAPC5Q9UJX4 755 aa20.26■□□□□ 0.83
CHMP6-204ENST00000572778 LOXL2Q9Y4K0 774 aa20.26■□□□□ 0.83
CHMP6-204ENST00000572778 MAP1BP46821 2468 aaKnown RBP20.25■□□□□ 0.83
CHMP6-204ENST00000572778 COL27A1Q8IZC6 1860 aaPredicted RBP20.25■□□□□ 0.83
CHMP6-204ENST00000572778 ZNF106Q9H2Y7 1883 aaKnown RBP20.25■□□□□ 0.83
CHMP6-204ENST00000572778 LILRA5A6NI73 299 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 GOLGA8MH3BSY2 632 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 TLX3O43711 291 aaPredicted RBP20.25■□□□□ 0.83
CHMP6-204ENST00000572778 AVILO75366 819 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 DXOO77932 396 aaKnown RBP20.25■□□□□ 0.83
CHMP6-204ENST00000572778 JMJD7P0C870 316 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 NMBRP28336 390 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 LIMK2P53671 638 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 CES3Q6UWW8 571 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 CREG2Q8IUH2 290 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 C17orf53Q8N3J3 647 aaPredicted RBP20.25■□□□□ 0.83
CHMP6-204ENST00000572778 LILRA3Q8N6C8 439 aaPredicted RBP20.25■□□□□ 0.83
CHMP6-204ENST00000572778 RCBTB1Q8NDN9 531 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 HM13Q8TCT9 377 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 ZNF578Q96N58 590 aaPredicted RBP20.25■□□□□ 0.83
CHMP6-204ENST00000572778 SLC46A1Q96NT5 459 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 CMKLR1Q99788 373 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 CCM2Q9BSQ5 444 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 UCK1Q9HA47 277 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 SLC40A1Q9NP59 571 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 THSD1Q9NS62 852 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 IMP3Q9NV31 184 aaKnown RBP20.25■□□□□ 0.83
CHMP6-204ENST00000572778 CFAP20Q9Y6A4 193 aaKnown RBP20.25■□□□□ 0.83
CHMP6-204ENST00000572778 PRSS21Q9Y6M0 314 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 WDFY3Q8IZQ1 3526 aa20.25■□□□□ 0.83
CHMP6-204ENST00000572778 C17orf113A0A1B0GUU1 675 aa20.24■□□□□ 0.83
CHMP6-204ENST00000572778 TMEM63AO94886 807 aa20.24■□□□□ 0.83
CHMP6-204ENST00000572778 AP2A2O94973 939 aa20.24■□□□□ 0.83
CHMP6-204ENST00000572778 SLC35G4P0C7Q5 338 aa20.24■□□□□ 0.83
CHMP6-204ENST00000572778 AMD1P17707 334 aa20.24■□□□□ 0.83
CHMP6-204ENST00000572778 PPARGP37231 505 aaPredicted RBP20.24■□□□□ 0.83
CHMP6-204ENST00000572778 GPR18Q14330 331 aa20.24■□□□□ 0.83
CHMP6-204ENST00000572778 C16orf72Q14CZ0 275 aa20.24■□□□□ 0.83
CHMP6-204ENST00000572778 SNAP47Q5SQN1 464 aa20.24■□□□□ 0.83
CHMP6-204ENST00000572778 CERS6Q6ZMG9 384 aa20.24■□□□□ 0.83
CHMP6-204ENST00000572778 RBM12BQ8IXT5 1001 aaKnown RBP20.24■□□□□ 0.83
CHMP6-204ENST00000572778 SPDYE1Q8NFV5 336 aaPredicted RBP20.24■□□□□ 0.83
CHMP6-204ENST00000572778 C12orf66Q96MD2 445 aa20.24■□□□□ 0.83
CHMP6-204ENST00000572778 INSM2Q96T92 566 aaPredicted RBP20.24■□□□□ 0.83
CHMP6-204ENST00000572778 EPB41L1Q9H4G0 881 aa20.24■□□□□ 0.83
CHMP6-204ENST00000572778 ASCL3Q9NQ33 180 aa20.24■□□□□ 0.83
CHMP6-204ENST00000572778 CATSPERZQ9NTU4 200 aa20.24■□□□□ 0.83
CHMP6-204ENST00000572778 PISDQ9UG56 409 aa20.24■□□□□ 0.83
CHMP6-204ENST00000572778 QSOX1O00391 747 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 OR1I1O60431 355 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 UBXN7O94888 489 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 TYRP1P17643 537 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 ITIH1P19827 911 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 PAFAH1B1P43034 410 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 ERVPABLB-1P60509 514 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 TRA2AQ13595 282 aaKnown RBP eCLIP20.23■□□□□ 0.83
CHMP6-204ENST00000572778 CASC4Q6P4E1 433 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 ZNF449Q6P9G9 518 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 WDR74Q6RFH5 385 aaPredicted RBP20.23■□□□□ 0.83
CHMP6-204ENST00000572778 IGF2-ASQ6U949 168 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 XKR5Q6UX68 686 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 LDB1Q86U70 411 aaPredicted RBP20.23■□□□□ 0.83
CHMP6-204ENST00000572778 CAND1Q86VP6 1230 aaKnown RBP20.23■□□□□ 0.83
CHMP6-204ENST00000572778 KLHL7Q8IXQ5 586 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 MCUQ8NE86 351 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 GPR150Q8NGU9 434 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 SNIP1Q8TAD8 396 aaKnown RBP20.23■□□□□ 0.83
CHMP6-204ENST00000572778 TMEM159Q96B96 161 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 MFSD3Q96ES6 412 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 SGSM3Q96HU1 749 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 KIFC1Q9BW19 673 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 COG4Q9H9E3 785 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 MRM3Q9HC36 420 aaKnown RBP20.23■□□□□ 0.83
CHMP6-204ENST00000572778 KCND1Q9NSA2 647 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 TREX1Q9NSU2 369 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 KLHL3Q9UH77 587 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 ASIC3Q9UHC3 531 aa20.23■□□□□ 0.83
CHMP6-204ENST00000572778 A8MU76 341 aa20.22■□□□□ 0.83
CHMP6-204ENST00000572778 CD3EAPO15446 510 aaKnown RBP20.22■□□□□ 0.83
CHMP6-204ENST00000572778 ITGA2BP08514 1039 aa20.22■□□□□ 0.83
CHMP6-204ENST00000572778 OR56A5P0C7T3 313 aa20.22■□□□□ 0.83
CHMP6-204ENST00000572778 THRAP10827 490 aa20.22■□□□□ 0.83
CHMP6-204ENST00000572778 MTHFD1P11586 935 aaKnown RBP20.22■□□□□ 0.83
CHMP6-204ENST00000572778 MLNP12872 115 aa20.22■□□□□ 0.83
CHMP6-204ENST00000572778 MAPK10P53779 464 aa20.22■□□□□ 0.83
CHMP6-204ENST00000572778 KRT33BQ14525 404 aa20.22■□□□□ 0.83
CHMP6-204ENST00000572778 SEMA3AQ14563 771 aa20.22■□□□□ 0.83
CHMP6-204ENST00000572778 AARS2Q5JTZ9 985 aaKnown RBP20.22■□□□□ 0.83
CHMP6-204ENST00000572778 DUS1LQ6P1R4 473 aaKnown RBP20.22■□□□□ 0.83
CHMP6-204ENST00000572778 PACS1Q6VY07 963 aa20.22■□□□□ 0.83
CHMP6-204ENST00000572778 JAMLQ86YT9 394 aa20.22■□□□□ 0.83
CHMP6-204ENST00000572778 MPP5Q8N3R9 675 aa20.22■□□□□ 0.83
CHMP6-204ENST00000572778 OTUD6BQ8N6M0 293 aa20.22■□□□□ 0.83
CHMP6-204ENST00000572778 JPH3Q8WXH2 748 aaPredicted RBP20.22■□□□□ 0.83
CHMP6-204ENST00000572778 XAB2Q9HCS7 855 aaKnown RBP20.22■□□□□ 0.83
CHMP6-204ENST00000572778 SAMD15Q9P1V8 674 aa20.22■□□□□ 0.83
CHMP6-204ENST00000572778 MARCH4Q9P2E8 410 aaPredicted RBP20.22■□□□□ 0.83
CHMP6-204ENST00000572778 SOX13Q9UN79 622 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms