RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 F7P08709 466 aaPredicted RBP15.51■□□□□ 0.07
CHD3-215ENST00000572750 BRAFP15056 766 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 PAMP19021 973 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 IDSP22304 550 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 NSG1P42857 185 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 ARCN1P48444 511 aaKnown RBP15.51■□□□□ 0.07
CHD3-215ENST00000572750 HIF1AQ16665 826 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 HP1BP3Q5SSJ5 553 aaPredicted RBP15.51■□□□□ 0.07
CHD3-215ENST00000572750 LYPLAL1Q5VWZ2 237 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 ARMC3Q5W041 872 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 C8orf74Q6P047 294 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 IYDQ6PHW0 289 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 CERS6Q6ZMG9 384 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 ZNF438Q7Z4V0 828 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 SPRED1Q7Z699 444 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 CCNJLQ8IV13 435 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 OR6C4Q8NGE1 309 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 OR2L2Q8NH16 312 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 LINC00615Q96LM1 132 aaPredicted RBP15.51■□□□□ 0.07
CHD3-215ENST00000572750 WDR83Q9BRX9 315 aaKnown RBP15.51■□□□□ 0.07
CHD3-215ENST00000572750 ABCG4Q9H172 646 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 PSMD13Q9UNM6 376 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 WDR37Q9Y2I8 494 aa15.51■□□□□ 0.07
CHD3-215ENST00000572750 ZCWPW2A0A1B0GU75 182 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 MGAT4DA6NG13 374 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 OR52A4PA6NMU1 304 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 RHPN2P1A8MT19 583 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 PPM1DO15297 605 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 USP1O94782 785 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 RPLP0P05388 317 aaKnown RBP15.5■□□□□ 0.07
CHD3-215ENST00000572750 CDK4P11802 303 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 SLC2A4P14672 509 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 PGAM1P18669 254 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 FASLGP48023 281 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 TTPAP49638 278 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 E2F1Q01094 437 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 HHEXQ03014 270 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 CRYMQ14894 314 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 ZNF470Q6ECI4 717 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 TMEM135Q86UB9 458 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 IGDCC3Q8IVU1 814 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 UNC5BQ8IZJ1 945 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 PDIK1LQ8N165 341 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 HM13Q8TCT9 377 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 TTC1Q99614 292 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 VPS37BQ9H9H4 285 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 GRHL1Q9NZI5 618 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 CHMP2BQ9UQN3 213 aa15.5■□□□□ 0.07
CHD3-215ENST00000572750 DNMT3AQ9Y6K1 912 aaPredicted RBP15.5■□□□□ 0.07
CHD3-215ENST00000572750 COL12A1Q99715 3063 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 KIR2DS5A0A0G2JLQ3 304 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 PRAMEF33A0A0G2JMD5 474 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 A0A0G2JNG1 304 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 A0A1W2PQM1 296 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 MAGEB16A2A368 324 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 KIR2DS3K7RE56 304 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 SMAPO00193 183 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 AP2A2O94973 939 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 ITGB6P18564 788 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 ARL4CP56559 192 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 OR1D5P58170 312 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 UBE2IP63279 158 aaKnown RBP15.49■□□□□ 0.07
CHD3-215ENST00000572750 CCL7P80098 99 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 SLC7A5Q01650 507 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 CALCOCO2Q13137 446 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 KIR2DS5Q14953 304 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 CLCA4Q14CN2 919 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 ZNF658BQ4V348 819 aaPredicted RBP15.49■□□□□ 0.07
CHD3-215ENST00000572750 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.49■□□□□ 0.07
CHD3-215ENST00000572750 AGAP9Q5VTM2 703 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 DUPD1Q68J44 220 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 MRNIPQ6NTE8 343 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 DUS1LQ6P1R4 473 aaKnown RBP15.49■□□□□ 0.07
CHD3-215ENST00000572750 TMPRSS7Q7RTY8 843 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 TRIM48Q8IWZ4 208 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 GALNT15Q8N3T1 639 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.49■□□□□ 0.07
CHD3-215ENST00000572750 NOA1Q8NC60 698 aaKnown RBP15.49■□□□□ 0.07
CHD3-215ENST00000572750 GPR150Q8NGU9 434 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 LKAAEAR1Q8TD35 194 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 CFAP36Q96G28 342 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 RMDN2Q96LZ7 410 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 EBNA1BP2Q99848 306 aaKnown RBP15.49■□□□□ 0.07
CHD3-215ENST00000572750 CCM2Q9BSQ5 444 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 WWP1Q9H0M0 922 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 RAB17Q9H0T7 212 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 STN1Q9H668 368 aaKnown RBP15.49■□□□□ 0.07
CHD3-215ENST00000572750 COG4Q9H9E3 785 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 SARS2Q9NP81 518 aaKnown RBP15.49■□□□□ 0.07
CHD3-215ENST00000572750 WHRNQ9P202 907 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 ZNF624Q9P2J8 865 aaPredicted RBP15.49■□□□□ 0.07
CHD3-215ENST00000572750 CPNE7Q9UBL6 633 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 CLCA2Q9UQC9 943 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 RAXQ9Y2V3 346 aa15.49■□□□□ 0.07
CHD3-215ENST00000572750 UTP11Q9Y3A2 253 aaKnown RBP15.49■□□□□ 0.07
CHD3-215ENST00000572750 UBA6A0AVT1 1052 aaPredicted RBP15.48■□□□□ 0.07
CHD3-215ENST00000572750 ESYT3A0FGR9 886 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 OR5K4A6NMS3 321 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 D6RAR5 112 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 KCNJ13O60928 360 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms