RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 IL27RAQ6UWB1 636 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 SYNE3Q6ZMZ3 975 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 FAM47EQ6ZV65 393 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 DNAJB7Q7Z6W7 309 aaPredicted RBP3.61□□□□□ -1.83
CDC27-213ENST00000571643 TBC1D10CQ8IV04 446 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 CCDC117Q8IWD4 279 aaPredicted RBP3.61□□□□□ -1.83
CDC27-213ENST00000571643 TMEM217Q8N7C4 229 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 PTGR2Q8N8N7 351 aaPredicted RBP3.61□□□□□ -1.83
CDC27-213ENST00000571643 ZNF540Q8NDQ6 660 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 OR14A16Q8NHC5 309 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 CEP70Q8NHQ1 597 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 HDAC7Q8WUI4 952 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 FAR1Q8WVX9 515 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 FEM1CQ96JP0 617 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 C16orf45Q96MC5 204 aaPredicted RBP3.61□□□□□ -1.83
CDC27-213ENST00000571643 TEFMQ96QE5 360 aaKnown RBP3.61□□□□□ -1.83
CDC27-213ENST00000571643 CADM1Q9BY67 442 aaKnown RBP3.61□□□□□ -1.83
CDC27-213ENST00000571643 LSG1Q9H089 658 aaKnown RBP3.61□□□□□ -1.83
CDC27-213ENST00000571643 GLT8D2Q9H1C3 349 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 RABEP2Q9H5N1 569 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 SYNCQ9H7C4 482 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 RMI1Q9H9A7 625 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 Q9N2J8 555 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 OBP2BQ9NPH6 170 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 PRDM8Q9NQV8 689 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 SLC22A11Q9NSA0 550 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 TMEM248Q9NWD8 314 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 C6orf203Q9P0P8 240 aaPredicted RBP3.61□□□□□ -1.83
CDC27-213ENST00000571643 KIF17Q9P2E2 1029 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 ADD3Q9UEY8 706 aaKnown RBP3.61□□□□□ -1.83
CDC27-213ENST00000571643 PCDHGB1Q9Y5G3 927 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 PCDHA10Q9Y5I2 948 aa3.61□□□□□ -1.83
CDC27-213ENST00000571643 PLXNB2O15031 1838 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 COL11A1P12107 1806 aaPredicted RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 PCNTO95613 3336 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 TCRBV7S3A2A0A539 114 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 ASB14A6NK59 587 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 LGALS16A8MUM7 142 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 BTBD18B2RXH4 712 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 KLRF2D3W0D1 207 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 H0YC42 278 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 BOLA2-SMG1P6H3BVE0 249 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 DDX39AO00148 427 aaKnown RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 IFIT3O14879 490 aaKnown RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 ZBTB43O43298 467 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 TXNL1O43396 289 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 NEMFO60524 1076 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 TSC22D2O75157 780 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 PTP4A3O75365 173 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 PALMO75781 387 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 HEXIM1O94992 359 aaKnown RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 SNX4O95219 450 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 SLU7O95391 586 aaKnown RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 TNFRSF6BO95407 300 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 ACADMP11310 421 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 ENO3P13929 434 aaPredicted RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 TYK2P29597 1187 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 KRT2P35908 639 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 RPS6KA3P51812 740 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 NUDT6P53370 316 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 CDH12P55289 794 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 POLR2FP61218 127 aaKnown RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 IFI35P80217 286 aaPredicted RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 ABATP80404 500 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 POU3F1Q03052 451 aaPredicted RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 PPARDQ03181 441 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 UBE3AQ05086 875 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 TROAPQ12815 778 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 CHAF1BQ13112 559 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 PRPF4BQ13523 1007 aaKnown RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 SHROOM1Q2M3G4 852 aaPredicted RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 WSCD2Q2TBF2 565 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 C2orf76Q3KRA6 126 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 PRAMEF19Q5SWL8 479 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 TMEM268Q5VZI3 342 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 TANGO2Q6ICL3 276 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 SNRNP48Q6IEG0 339 aaKnown RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 ACAD10Q6JQN1 1059 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 JMJD6Q6NYC1 403 aaPredicted RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 NUP54Q7Z3B4 507 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 MOGAT3Q86VF5 341 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 TMC8Q8IU68 726 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 CPOQ8IVL8 374 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 MB21D2Q8IYB1 491 aaPredicted RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 CCDC170Q8IYT3 715 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 HORMAD2Q8N7B1 307 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 ANKRD20A12PQ8NF67 263 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 OR52K2Q8NGK3 314 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 MOSPD2Q8NHP6 518 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 CTCFLQ8NI51 663 aaPredicted RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 ZNF75CPQ92670 426 aaPredicted RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 ZUFSPQ96AP4 578 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 ARRDC3Q96B67 414 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 RTP4Q96DX8 246 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 NEK1Q96PY6 1258 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 GFM1Q96RP9 751 aaKnown RBP3.6□□□□□ -1.83
CDC27-213ENST00000571643 SPZ1Q9BXG8 430 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 DNAI2Q9GZS0 605 aa3.6□□□□□ -1.83
CDC27-213ENST00000571643 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.6□□□□□ -1.83
CDC27-213ENST00000571643 NT5C3AQ9H0P0 336 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms