RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 AMZ2Q86W34 360 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 ANKMY2Q8IV38 441 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 VRK3Q8IV63 474 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 OR2L2Q8NH16 312 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 MAPK15Q8TD08 544 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 SCG3Q8WXD2 468 aaKnown RBP6.85□□□□□ -1.31
SMG6-209ENST00000571442 STAMBPL1Q96FJ0 436 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 DCUN1D1Q96GG9 259 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 RMDN2Q96LZ7 410 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 TTC25Q96NG3 672 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 BIRC8Q96P09 236 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 EBNA1BP2Q99848 306 aaKnown RBP6.85□□□□□ -1.31
SMG6-209ENST00000571442 TBC1D10AQ9BXI6 508 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 WWP1Q9H0M0 922 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 P2RY12Q9H244 342 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 OR52A5Q9H2C5 316 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 COG4Q9H9E3 785 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 CATSPERZQ9NTU4 200 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 OGFRQ9NZT2 677 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 TMEM9Q9P0T7 183 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 DMGDHQ9UI17 866 aaKnown RBP6.85□□□□□ -1.31
SMG6-209ENST00000571442 ANAPC5Q9UJX4 755 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 CDYLQ9Y232 598 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 MED16Q9Y2X0 877 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 MAD1L1Q9Y6D9 718 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 TEX264Q9Y6I9 313 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 BAHCC1Q9P281 2608 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 IGHV1OR21-1A0A087WYE8 117 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 SLC5A10A0PJK1 596 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 FAM221BA6H8Z2 402 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 PDZK1P1A8MUH7 402 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 AP3B1O00203 1094 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 AGRPO00253 132 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 NUDT21O43809 227 aaKnown RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 NIPSNAP2O75323 286 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 USP1O94782 785 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 S1PR4O95977 384 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 MT-CO3P00414 261 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 C1QAP02745 245 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 RPLP0P05388 317 aaKnown RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 GP1BAP07359 652 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 TPBGLP0DKB5 382 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 ERVK-10P10266 1014 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 HOXB3P14651 431 aaPredicted RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 PGAM1P18669 254 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 MPSTP25325 297 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 CD1CP29017 333 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 ECHS1P30084 290 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 CCR7P32248 378 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 NSG1P42857 185 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 SLC1A2P43004 574 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 FASLGP48023 281 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 DUSP3P51452 185 aaPredicted RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 CSE1LP55060 971 aaKnown RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 PPP1CAP62136 330 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 SARNPP82979 210 aaKnown RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 TIAL1Q01085 375 aaKnown RBP eCLIP6.84□□□□□ -1.31
SMG6-209ENST00000571442 HHEXQ03014 270 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 CKAP4Q07065 602 aaKnown RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 PDIA2Q13087 525 aaKnown RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 TARDBPQ13148 414 aaKnown RBP eCLIP6.84□□□□□ -1.31
SMG6-209ENST00000571442 ILKQ13418 452 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 HSP90AA5PQ58FG0 334 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 AGAP9Q5VTM2 703 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 STEAP4Q687X5 459 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 CAPRIN2Q6IMN6 1127 aaKnown RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 NEPROQ6NW34 567 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 ZNF549Q6P9A3 640 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 WASH2PQ6VEQ5 465 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 CCNI2Q6ZMN8 369 aaPredicted RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 USP53Q70EK8 1073 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 PCGF5Q86SE9 256 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 CILP2Q8IUL8 1156 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 CCNJLQ8IV13 435 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 CFAP206Q8IYR0 622 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 MMGT1Q8N4V1 131 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 DCBLD1Q8N8Z6 715 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 LMNTD1Q8N9Z9 388 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 KIF18AQ8NI77 898 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 FBXO25Q8TCJ0 367 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 SEC14L1Q92503 715 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 LPGAT1Q92604 370 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 GATA6Q92908 595 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 NAT6Q93015 286 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 ART4Q93070 314 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 FAM136AQ96C01 138 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 CFAP36Q96G28 342 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 SLC30A3Q99726 388 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 NUDT22Q9BRQ3 303 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 CCM2Q9BSQ5 444 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 CARD6Q9BX69 1037 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 FOXP3Q9BZS1 431 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 ZCCHC2Q9C0B9 1178 aaKnown RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 LRRN3Q9H3W5 708 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 SYNDIG1Q9H7V2 258 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 RDH14Q9HBH5 336 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 SARS2Q9NP81 518 aaKnown RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 WASH6PQ9NQA3 447 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 FBXO6Q9NRD1 293 aaPredicted RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 SMYD2Q9NRG4 433 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms