RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 RHOT2Q8IXI1 618 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 ZNF567Q8N184 647 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 SPDYE1Q8NFV5 336 aaPredicted RBP8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 BRSK1Q8TDC3 778 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 MR1Q95460 341 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 MRGPRX2Q96LB1 330 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 INSM2Q96T92 566 aaPredicted RBP8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 APOL2Q9BQE5 337 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 WWP1Q9H0M0 922 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 ACTL8Q9H568 366 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 PDE7BQ9NP56 450 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 FGF21Q9NSA1 209 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 ABHD10Q9NUJ1 306 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 HRASLS2Q9NWW9 162 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 DDX56Q9NY93 547 aaKnown RBP8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 IL17CQ9P0M4 197 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 EPHA6Q9UF33 1036 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 KCND3Q9UK17 655 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 TFR2Q9UP52 801 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 ARL5AQ9Y689 179 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 ESPL1Q14674 2120 aa8.42□□□□□ -1.06
CTDNEP1-203ENST00000570385 OR6C74A6NCV1 312 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 GAPDHSO14556 408 aaPredicted RBP8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 STX7O15400 261 aaKnown RBP8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 AGTP01019 485 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 MTHFD1P11586 935 aaKnown RBP8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 MSH3P20585 1137 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 SLC1A1P43005 524 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 UQCRFS1P47985 274 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 NR2C2P49116 596 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 CCL11P51671 97 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 PMS2P54278 862 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 TFDP2Q14188 446 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 GSE1Q14687 1217 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 SLC1A5Q15758 541 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 SLC14A2Q15849 920 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 CRTC2Q53ET0 693 aaPredicted RBP8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 LDLRAP1Q5SW96 308 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 HIST2H2BCQ6DN03 193 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 TCTN3Q6NUS6 607 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 VSIG1Q86XK7 387 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 CCDC50Q8IVM0 306 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 RBM12BQ8IXT5 1001 aaKnown RBP8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 LILRA3Q8N6C8 439 aaPredicted RBP8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 DDHD1Q8NEL9 900 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 ZNF398Q8TD17 642 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 UBXN4Q92575 508 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 P3H4Q92791 437 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 MIB2Q96AX9 1013 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 SLC41A2Q96JW4 573 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 C12orf66Q96MD2 445 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 FCRL5Q96RD9 977 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 SRPK1Q96SB4 655 aaKnown RBP8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 NRTNQ99748 197 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 FICDQ9BVA6 458 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 HEMGNQ9BXL5 484 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 ZCCHC2Q9C0B9 1178 aaKnown RBP8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 TRABDQ9H4I3 376 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 FAM96AQ9H5X1 160 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 RSPH14Q9UHP6 348 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 PKP3Q9Y446 797 aa8.41□□□□□ -1.06
CTDNEP1-203ENST00000570385 BLACEA4D250 179 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 OR5K3A6NET4 321 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 GOLGA6L3A6NEY3 463 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 ARGFXA6NJG6 315 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 TTLL8A6PVC2 850 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 H7C0C1 242 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 CCL22O00626 93 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 CBFA2T2O43439 604 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 MFAP3LO75121 409 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 SCRG1O75711 98 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 LCA5LO95447 670 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 PRAMEF1O95521 474 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 EPOP01588 193 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 MT-ND3P03897 115 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 POLR2CP19387 275 aaPredicted RBP8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 PTPN4P29074 926 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 ATP5OP48047 213 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 HSD11B2P80365 405 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 TMPRSS15P98073 1019 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 ACY1Q03154 408 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 DMPKQ09013 629 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 GPS2Q13227 327 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 SEMA5AQ13591 1074 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 IL10RAQ13651 578 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 TRIM14Q14142 442 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 KRT33BQ14525 404 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 TAZQ16635 292 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 LONRF2Q1L5Z9 754 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 NADK2Q4G0N4 442 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 TFDP3Q5H9I0 405 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 ZDHHC20Q5W0Z9 365 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 METRNLQ641Q3 311 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 LCN10Q6JVE6 187 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 ARMC6Q6NXE6 501 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 KLHL35Q6PF15 583 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 BZW1Q7L1Q6 419 aaKnown RBP8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 DAAM2Q86T65 1068 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 ATCAYQ86WG3 371 aa8.4□□□□□ -1.06
CTDNEP1-203ENST00000570385 TMEM126BQ8IUX1 230 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms