RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 KLF15Q9UIH9 416 aa23.05■■□□□ 1.28
RAB40C-212ENST00000569575 OR5K4A6NMS3 321 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 PATE3B3GLJ2 98 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 LMO7DNF2Z398 122 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 RASGRF2O14827 1237 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 AQP9O43315 295 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 TRIM16O95361 564 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 ENO3P13929 434 aaPredicted RBP23.04■■□□□ 1.28
RAB40C-212ENST00000569575 FDXRP22570 491 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 CRABP2P29373 138 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 SLC26A3P40879 764 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 CTBSQ01459 385 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 NHLH1Q02575 133 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 PRRT3Q5FWE3 981 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 UBAP2Q5T6F2 1119 aaKnown RBP23.04■■□□□ 1.28
RAB40C-212ENST00000569575 GPATCH11Q8N954 259 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 UHMK1Q8TAS1 419 aaKnown RBP23.04■■□□□ 1.28
RAB40C-212ENST00000569575 ELMO1Q92556 727 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 TMEM159Q96B96 161 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 LRRC61Q9BV99 259 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 DUSP23Q9BVJ7 150 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 TMEM168Q9H0V1 697 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 KLC4Q9NSK0 619 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 FAM86C1Q9NVL1 165 aa23.04■■□□□ 1.28
RAB40C-212ENST00000569575 PNMA8BQ9ULN7 279 aaPredicted RBP23.04■■□□□ 1.28
RAB40C-212ENST00000569575 GPC4O75487 556 aa23.03■■□□□ 1.28
RAB40C-212ENST00000569575 SLCO2B1O94956 709 aa23.03■■□□□ 1.28
RAB40C-212ENST00000569575 ACP5P13686 325 aa23.03■■□□□ 1.28
RAB40C-212ENST00000569575 STMN1P16949 149 aa23.03■■□□□ 1.28
RAB40C-212ENST00000569575 EPHA8P29322 1005 aaPredicted RBP23.03■■□□□ 1.28
RAB40C-212ENST00000569575 EFTUD2Q15029 972 aaKnown RBP eCLIP23.03■■□□□ 1.287e-7■■■■■ 38.1
RAB40C-212ENST00000569575 ZNF658BQ4V348 819 aaPredicted RBP23.03■■□□□ 1.28
RAB40C-212ENST00000569575 TIFABQ6ZNK6 161 aa23.03■■□□□ 1.28
RAB40C-212ENST00000569575 NEK10Q6ZWH5 1172 aa23.03■■□□□ 1.28
RAB40C-212ENST00000569575 HDXQ7Z353 690 aa23.03■■□□□ 1.28
RAB40C-212ENST00000569575 PNPLA1Q8N8W4 532 aa23.03■■□□□ 1.28
RAB40C-212ENST00000569575 ZNF548Q8NEK5 533 aaPredicted RBP23.03■■□□□ 1.28
RAB40C-212ENST00000569575 ANKRD7Q92527 254 aa23.03■■□□□ 1.28
RAB40C-212ENST00000569575 GLMNQ92990 594 aa23.03■■□□□ 1.28
RAB40C-212ENST00000569575 ELMO2Q96JJ3 720 aa23.03■■□□□ 1.28
RAB40C-212ENST00000569575 VIPAS39Q9H9C1 493 aa23.03■■□□□ 1.28
RAB40C-212ENST00000569575 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.03■■□□□ 1.28
RAB40C-212ENST00000569575 SLC17A6Q9P2U8 582 aa23.03■■□□□ 1.28
RAB40C-212ENST00000569575 TRMT6Q9UJA5 497 aaKnown RBP23.03■■□□□ 1.28
RAB40C-212ENST00000569575 PLAAQ9Y263 795 aa23.03■■□□□ 1.28
RAB40C-212ENST00000569575 SLC5A10A0PJK1 596 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 SCAMP1O15126 338 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 NIPSNAP2O75323 286 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 ALPPL2P10696 532 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 DGKAP23743 735 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 CCR7P32248 378 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 RGS4P49798 205 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 CLCN7P51798 805 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 PDAP1Q13442 181 aaKnown RBP23.02■■□□□ 1.28
RAB40C-212ENST00000569575 USP10Q14694 798 aaKnown RBP23.02■■□□□ 1.28
RAB40C-212ENST00000569575 INAVAQ3KP66 663 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 ABRAXAS1Q6UWZ7 409 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 MICALCLQ6ZW33 695 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 TAF8Q7Z7C8 310 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 CFAP206Q8IYR0 622 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 ZBTB2Q8N680 514 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 ISL2Q96A47 359 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 CCDC97Q96F63 343 aaPredicted RBP23.02■■□□□ 1.28
RAB40C-212ENST00000569575 PDLIM5Q96HC4 596 aaKnown RBP23.02■■□□□ 1.28
RAB40C-212ENST00000569575 CABS1Q96KC9 395 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 COG4Q9H9E3 785 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 NCKIPSDQ9NZQ3 722 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 DOLKQ9UPQ8 538 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 MED16Q9Y2X0 877 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 MTO1Q9Y2Z2 717 aaKnown RBP23.02■■□□□ 1.28
RAB40C-212ENST00000569575 NFS1Q9Y697 457 aa23.02■■□□□ 1.28
RAB40C-212ENST00000569575 OTOGLQ3ZCN5 2332 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 LNP1A1A4G5 178 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 CCDC189A1A4V9 331 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 PIAS1O75925 651 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 SHBGP04278 402 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 ANXA6P08133 673 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 GCAP28676 217 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 ACTR1BP42025 376 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 RAB10P61026 200 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 ACTR1AP61163 376 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 SPEM2Q0P670 501 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 GBX1Q14549 363 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 CASP8Q14790 479 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 ZKSCAN8Q15776 578 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-212ENST00000569575 SYTL3Q4VX76 610 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 ZNF542PQ5EBM4 170 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 FBXO38Q6PIJ6 1188 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 LCA5Q86VQ0 697 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 NKAPQ8N5F7 415 aaKnown RBP23.01■■□□□ 1.27
RAB40C-212ENST00000569575 MINDY1Q8N5J2 469 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 LMX1AQ8TE12 382 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 SAP25Q8TEE9 199 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 GULP1Q9UBP9 304 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 SLC23A2Q9UGH3 650 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 PRKAB1Q9Y478 270 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 GPR179Q6PRD1 2367 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 ZFC3H1O60293 1989 aaKnown RBP23.01■■□□□ 1.27
RAB40C-212ENST00000569575 CABIN1Q9Y6J0 2220 aa23.01■■□□□ 1.27
RAB40C-212ENST00000569575 FAM155BO75949 473 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms