RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 KCTD3Q9Y597 815 aa14.25□□□□□ -0.13
COMMD4-225ENST00000569245 URB1O60287 2271 aaKnown RBP14.25□□□□□ -0.13
COMMD4-225ENST00000569245 RP1P56715 2156 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 CHD6Q8TD26 2715 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 MYLKQ15746 1914 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 OR5K4A6NMS3 321 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 PDZK1P1A8MUH7 402 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 GPR39O43194 453 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 PRAMEF1O95521 474 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 F3P13726 295 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 TPH1P17752 444 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 MSH3P20585 1137 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 AKT1P31749 480 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 ABCG1P45844 678 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 MAPK9P45984 424 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 FASLGP48023 281 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 NPY2RP49146 381 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 ZFP36L1Q07352 338 aaKnown RBP14.24□□□□□ -0.13
COMMD4-225ENST00000569245 DHX9Q08211 1270 aaKnown RBP14.24□□□□□ -0.13
COMMD4-225ENST00000569245 CDH17Q12864 832 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 NR1D2Q14995 579 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 DNAJC21Q5F1R6 531 aaKnown RBP14.24□□□□□ -0.13
COMMD4-225ENST00000569245 DENND5AQ6IQ26 1287 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 MREGQ8N565 214 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 ZNF248Q8NDW4 579 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 OR52K1Q8NGK4 314 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 OR10G6Q8NH81 332 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 DTX3LQ8TDB6 740 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 SH3KBP1Q96B97 665 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 LRRC39Q96DD0 335 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 CMKLR1Q99788 373 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 NUDT22Q9BRQ3 303 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 TIMM29Q9BSF4 260 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 SEMA6CQ9H3T2 930 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 ASB8Q9H765 288 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 SARS2Q9NP81 518 aaKnown RBP14.24□□□□□ -0.13
COMMD4-225ENST00000569245 ASCL3Q9NQ33 180 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 WDR70Q9NW82 654 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 PISDQ9UG56 409 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 FKBPLQ9UIM3 349 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 RALYQ9UKM9 306 aaKnown RBP14.24□□□□□ -0.13
COMMD4-225ENST00000569245 LOXL2Q9Y4K0 774 aa14.24□□□□□ -0.13
COMMD4-225ENST00000569245 IGHV1OR21-1A0A087WYE8 117 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 KIR2DS5A0A0G2JLQ3 304 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 A0A0G2JNG1 304 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 KIR2DS3K7RE56 304 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 AVILO75366 819 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 SRP72O76094 671 aaKnown RBP14.23□□□□□ -0.13
COMMD4-225ENST00000569245 HGFP14210 728 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 MPSTP25325 297 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 RPL10P27635 214 aaKnown RBP14.23□□□□□ -0.13
COMMD4-225ENST00000569245 ITPKBP27987 946 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 CLCNKAP51800 687 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 PDIA2Q13087 525 aaKnown RBP14.23□□□□□ -0.13
COMMD4-225ENST00000569245 SEPT6Q14141 434 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 KIR2DS5Q14953 304 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 CLPPQ16740 277 aaPredicted RBP14.23□□□□□ -0.13
COMMD4-225ENST00000569245 MSS51Q4VC12 460 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 GPRC6AQ5T6X5 926 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 ARMC3Q5W041 872 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 TMPRSS9Q7Z410 1059 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 ZNF547Q8IVP9 402 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 TRIM48Q8IWZ4 208 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 RASGEF1AQ8N9B8 481 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 AVL9Q8NBF6 648 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 TMEM159Q96B96 161 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 PRR11Q96HE9 360 aaPredicted RBP14.23□□□□□ -0.13
COMMD4-225ENST00000569245 SIGLEC10Q96LC7 697 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 SAYSD1Q9NPB0 183 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 CPNE7Q9UBL6 633 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 ITPR1Q14643 2758 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 NBEAQ8NFP9 2946 aa14.23□□□□□ -0.13
COMMD4-225ENST00000569245 A6NCN8 305 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 SDR42E2A6NKP2 422 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 OR2AG2A6NM03 316 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 GAPDHSO14556 408 aaPredicted RBP14.22□□□□□ -0.13
COMMD4-225ENST00000569245 DUX1O43812 170 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 POP7O75817 140 aaKnown RBP14.22□□□□□ -0.13
COMMD4-225ENST00000569245 VIPP01282 170 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 ITGA2BP08514 1039 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 HOXB3P14651 431 aaPredicted RBP14.22□□□□□ -0.13
COMMD4-225ENST00000569245 IDSP22304 550 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 HADHAP40939 763 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 MLLT3P42568 568 aaPredicted RBP14.22□□□□□ -0.13
COMMD4-225ENST00000569245 MAGEA4P43358 317 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 PMS2P54278 862 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 GPLD1P80108 840 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 BBS9Q3SYG4 887 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.22□□□□□ -0.13
COMMD4-225ENST00000569245 TMEM220Q6QAJ8 160 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 IGF2-ASQ6U949 168 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 TRMT10CQ7L0Y3 403 aaKnown RBP14.22□□□□□ -0.13
COMMD4-225ENST00000569245 DET1Q7L5Y6 550 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 AMZ2Q86W34 360 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 CCDC25Q86WR0 208 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 SLITRK4Q8IW52 837 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 ZBED8Q8IZ13 594 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 AGGF1Q8N302 714 aaeCLIP14.22□□□□□ -0.13
COMMD4-225ENST00000569245 DNAAF3Q8N9W5 541 aa14.22□□□□□ -0.13
COMMD4-225ENST00000569245 DDHD1Q8NEL9 900 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms