RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	ERC1	Q8IUD2	1116 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	PLD3	Q8IV08	490 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	C1orf52	Q8N6N3	182 aa	Known RBP	2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	ANKRD52	Q8NB46	1076 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	EGLN2	Q96KS0	407 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	PPM1M	Q96MI6	270 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	SEC62	Q99442	399 aa	Known RBP	2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	RHNO1	Q9BSD3	238 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	FGFBP2	Q9BYJ0	223 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	UNC45A	Q9H3U1	944 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	EPB41L5	Q9HCM4	733 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	RCC2	Q9P258	522 aa	Known RBP	2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	LIMA1	Q9UHB6	759 aa	Known RBP	2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	ASIC3	Q9UHC3	531 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	C1orf226	A1L170	272 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	PLK4	O00444	970 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	SRSF10	O75494	262 aa	Known RBP	2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	AP2A2	O94973	939 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	MLYCD	O95822	493 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	EDN1	P05305	212 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	HSPA1A	P0DMV8	641 aa	Known RBP	2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	HSPA1B	P0DMV9	641 aa	Known RBP	2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	EPHA2	P29317	976 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	PBX3	P40426	434 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	GAGE2B	Q13066	116 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	MFAP5	Q13361	173 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	FRG1	Q14331	258 aa	Known RBP	2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	GAGE2E	Q4V326	116 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	GAGE2A	Q6NT46	116 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	NCEH1	Q6PIU2	408 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	SARM1	Q6SZW1	724 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	GLDN	Q6ZMI3	551 aa	Predicted RBP	2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	FASTKD5	Q7L8L6	764 aa	Known RBP	2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	CNTROB	Q8N137	903 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	SCML4	Q8N228	414 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	FRMD1	Q8N878	549 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	OR2T12	Q8NG77	320 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	HM13	Q8TCT9	377 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	C7orf26	Q96N11	449 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	PSD2	Q9BQI7	771 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	PIGM	Q9H3S5	423 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	MTMR10	Q9NXD2	777 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	EHD2	Q9NZN4	543 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	KLHL8	Q9P2G9	620 aa	Predicted RBP	2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	GAGE2D	Q9UEU5	116 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	KCNE2	Q9Y6J6	123 aa		2.96	□□□□□ -1.94
UBR1-209	ENST00000569243	ATRX	P46100	2492 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	ARHGEF40	Q8TER5	1519 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243		A0A087WW49	117 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	RTL8C	O15255	209 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	TMCC2	O75069	709 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	BMP10	O95393	424 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	HIST1H2AB	P04908	130 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	EIF2S1	P05198	315 aa	Known RBP	2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	HIST1H2AD	P20671	130 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	NFKBIA	P25963	317 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	TLX1	P31314	330 aa	Predicted RBP	2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	RGS2	P41220	211 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	MMP15	P51511	669 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	CEBPZ	Q03701	1054 aa	Known RBP	2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	RIG	Q13278	110 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	NAB2	Q15742	525 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	ALF	Q53S48	1182 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	FFAR4	Q5NUL3	377 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	NDUFAF5	Q5TEU4	345 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	CYP20A1	Q6UW02	462 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	TPRG1	Q6ZUI0	275 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	TMTC3	Q6ZXV5	915 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	HIST3H2A	Q7L7L0	130 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	ISCA2	Q86U28	154 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	PTOV1	Q86YD1	416 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	LSMEM2	Q8N112	164 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	RASGEF1C	Q8N431	466 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	OR2T6	Q8NHC8	308 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	ARHGEF2	Q92974	986 aa	Known RBP	2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	SLC47A1	Q96FL8	570 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	PERP	Q96FX8	193 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	DACH2	Q96NX9	599 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	PITPNM3	Q9BZ71	974 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	MUC13	Q9H3R2	512 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	POLR1B	Q9H9Y6	1135 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	RPS10P5	Q9NQ39	176 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	FLRT3	Q9NZU0	649 aa		2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	TDRD9	Q8NDG6	1382 aa	Known RBP	2.95	□□□□□ -1.94
UBR1-209	ENST00000569243	ZNF318	Q5VUA4	2279 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	IGLV7-46	A0A075B6I9	117 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	IGHV4-4	A0A075B6R2	117 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	IGHV4-61	A0A0C4DH41	118 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	LIPT2	A6NK58	231 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	RTN3	O95197	1032 aa	Predicted RBP	2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	IGHV4-59	P01825	116 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	HMBS	P08397	361 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	SPARC	P09486	303 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	FRMD6-AS1	P0C7T7	363 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	TRIM49	P0CI25	452 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	TRIM49C	P0CI26	452 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	SELL	P14151	372 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	GPR143	P51810	404 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	RPS3A	P61247	264 aa	Known RBP	2.94	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms