RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 TTC1Q99614 292 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 EBNA1BP2Q99848 306 aaKnown RBP13.54□□□□□ -0.24
NEIL1-220ENST00000568881 FOXP3Q9BZS1 431 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 EPB41L1Q9H4G0 881 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 UGT1A7Q9HAW7 530 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 UGT1A10Q9HAW8 530 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 UGT1A8Q9HAW9 530 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 ARFGAP3Q9NP61 516 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 SARS2Q9NP81 518 aaKnown RBP13.54□□□□□ -0.24
NEIL1-220ENST00000568881 KLC4Q9NSK0 619 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 TREX1Q9NSU2 369 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 SMOXQ9NWM0 555 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 KCNK4Q9NYG8 393 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 DMGDHQ9UI17 866 aaKnown RBP13.54□□□□□ -0.24
NEIL1-220ENST00000568881 RABGEF1Q9UJ41 708 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 CRLS1Q9UJA2 301 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 SATB2Q9UPW6 733 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 PRKAB1Q9Y478 270 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 DNMT3AQ9Y6K1 912 aaPredicted RBP13.54□□□□□ -0.24
NEIL1-220ENST00000568881 RPS6KL1Q9Y6S9 549 aa13.54□□□□□ -0.24
NEIL1-220ENST00000568881 A0A1W2PQM1 296 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 CCDC162PA2VCL2 907 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 AGAP14A8MT82 685 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 PDZK1P1A8MUH7 402 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 CFAP99D6REC4 459 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 PLD2O14939 933 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 EIF3HO15372 352 aaKnown RBP eCLIP13.53□□□□□ -0.24
NEIL1-220ENST00000568881 DUX1O43812 170 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 SLU7O95391 586 aaKnown RBP13.53□□□□□ -0.24
NEIL1-220ENST00000568881 TTC4O95801 387 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 RHOXF2BP0C7M4 288 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 ZNF7P17097 686 aaPredicted RBP13.53□□□□□ -0.24
NEIL1-220ENST00000568881 PGAM1P18669 254 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 IDSP22304 550 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 HALP42357 657 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 ABCG1P45844 678 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 PDIA2Q13087 525 aaKnown RBP13.53□□□□□ -0.24
NEIL1-220ENST00000568881 TRA2AQ13595 282 aaKnown RBP eCLIP13.53□□□□□ -0.24
NEIL1-220ENST00000568881 TRADDQ15628 312 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 AMZ1Q400G9 498 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 ANKRD20A4Q4UJ75 823 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 MSS51Q4VC12 460 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 TEX35Q5T0J7 233 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 PHF19Q5T6S3 580 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 BROXQ5VW32 411 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 IYDQ6PHW0 289 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 FOXR1Q6PIV2 292 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 CES3Q6UWW8 571 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 RAB11FIP2Q7L804 512 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 TAS2R42Q7RTR8 314 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 TMEM135Q86UB9 458 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 IFT20Q8IY31 132 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 FBXO39Q8N4B4 442 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 OR4L1Q8NH43 312 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 FBXO25Q8TCJ0 367 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 SLC37A2Q8TED4 501 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 IFT81Q8WYA0 676 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 ZNF669Q96BR6 464 aaPredicted RBP13.53□□□□□ -0.24
NEIL1-220ENST00000568881 MFSD3Q96ES6 412 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 DCUN1D1Q96GG9 259 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 SGSM3Q96HU1 749 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 PWWP2AQ96N64 755 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 DCBLD2Q96PD2 775 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 RHOXF2Q9BQY4 288 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 TSPYL1Q9H0U9 437 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 TBC1D29Q9UFV1 150 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 MTRF1LQ9UGC7 380 aaKnown RBP13.53□□□□□ -0.24
NEIL1-220ENST00000568881 PLEKHM1Q9Y4G2 1056 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 ASXL3Q9C0F0 2248 aa13.53□□□□□ -0.24
NEIL1-220ENST00000568881 RP1P56715 2156 aa13.52□□□□□ -0.24
NEIL1-220ENST00000568881 A0A087WV48 116 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 BHMG1C9JSJ3 638 aaPredicted RBP13.52□□□□□ -0.25
NEIL1-220ENST00000568881 E7ESA3 106 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 MTX2O75431 263 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 BANF1O75531 89 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 USP1O94782 785 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 VAPBO95292 243 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 GOT2P00505 430 aaKnown RBP13.52□□□□□ -0.25
NEIL1-220ENST00000568881 ITGA2BP08514 1039 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 HOXB3P14651 431 aaPredicted RBP13.52□□□□□ -0.25
NEIL1-220ENST00000568881 PPARGP37231 505 aaPredicted RBP13.52□□□□□ -0.25
NEIL1-220ENST00000568881 EPHA4P54764 986 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 OR1D5P58170 312 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 B4GALNT1Q00973 533 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 CBLBQ13191 982 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 CUL1Q13616 776 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 FASTKD1Q53R41 847 aaKnown RBP13.52□□□□□ -0.25
NEIL1-220ENST00000568881 AARS2Q5JTZ9 985 aaKnown RBP13.52□□□□□ -0.25
NEIL1-220ENST00000568881 GPRC6AQ5T6X5 926 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 TMEM164Q5U3C3 297 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 LYPLAL1Q5VWZ2 237 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 KIAA0930Q6ICG6 404 aaPredicted RBP13.52□□□□□ -0.25
NEIL1-220ENST00000568881 ZDHHC24Q6UX98 284 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 CERS6Q6ZMG9 384 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 CEP128Q6ZU80 1094 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 AMZ2Q86W34 360 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 RBM12BQ8IXT5 1001 aaKnown RBP13.52□□□□□ -0.25
NEIL1-220ENST00000568881 AGGF1Q8N302 714 aaeCLIP13.52□□□□□ -0.25
NEIL1-220ENST00000568881 NXPE1Q8N323 547 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 PATE1Q8WXA2 126 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms