RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 UBA6A0AVT1 1052 aaPredicted RBP18.22■□□□□ 0.51
LINC01238-205ENST00000567549 MATN2O00339 956 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 SPAG6O75602 509 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 KIAA0754O94854 1291 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 PRAMEF1O95521 474 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 HADHAP40939 763 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 LEPRP48357 1165 aaKnown RBP18.22■□□□□ 0.51
LINC01238-205ENST00000567549 NFKB2Q00653 900 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 PRKAA1Q13131 559 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 TUBB3Q13509 450 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 KRT33BQ14525 404 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 TAF1AQ15573 450 aaPredicted RBP18.22■□□□□ 0.51
LINC01238-205ENST00000567549 CHRNA6Q15825 494 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 KHDC1Q4VXA5 237 aaKnown RBP18.22■□□□□ 0.51
LINC01238-205ENST00000567549 DNTTIP2Q5QJE6 756 aaKnown RBP18.22■□□□□ 0.51
LINC01238-205ENST00000567549 GPRC6AQ5T6X5 926 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 FAM92BQ6ZTR7 304 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 GALNT6Q8NCL4 622 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 CCM2Q9BSQ5 444 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 GPR87Q9BY21 358 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 TRIM5Q9C035 493 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 FANCEQ9HB96 536 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 IMP3Q9NV31 184 aaKnown RBP18.22■□□□□ 0.51
LINC01238-205ENST00000567549 SEMA5BQ9P283 1151 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 CROTQ9UKG9 612 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 HYOU1Q9Y4L1 999 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 PCDHGA6Q9Y5G7 932 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 BOD1L1Q8NFC6 3051 aa18.22■□□□□ 0.51
LINC01238-205ENST00000567549 TENM4Q6N022 2769 aa18.21■□□□□ 0.51
LINC01238-205ENST00000567549 MGAT4DA6NG13 374 aa18.21■□□□□ 0.51
LINC01238-205ENST00000567549 OR2AG2A6NM03 316 aa18.21■□□□□ 0.51
LINC01238-205ENST00000567549 KATNA1O75449 491 aa18.21■□□□□ 0.51
LINC01238-205ENST00000567549 MTHFD1P11586 935 aaKnown RBP18.21■□□□□ 0.51
LINC01238-205ENST00000567549 OAS2P29728 719 aaKnown RBP18.21■□□□□ 0.51
LINC01238-205ENST00000567549 HSD11B2P80365 405 aa18.21■□□□□ 0.51
LINC01238-205ENST00000567549 RPE65Q16518 533 aa18.21■□□□□ 0.51
LINC01238-205ENST00000567549 METRNLQ641Q3 311 aa18.21■□□□□ 0.51
LINC01238-205ENST00000567549 B4GALNT4Q76KP1 1039 aa18.21■□□□□ 0.51
LINC01238-205ENST00000567549 RASGEF1AQ8N9B8 481 aa18.21■□□□□ 0.51
LINC01238-205ENST00000567549 SLC41A2Q96JW4 573 aa18.21■□□□□ 0.51
LINC01238-205ENST00000567549 MACROD2A1Z1Q3 448 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 LCA5LO95447 670 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 PTMAP06454 111 aaKnown RBP18.2■□□□□ 0.5
LINC01238-205ENST00000567549 RPS15P62841 145 aaKnown RBP18.2■□□□□ 0.5
LINC01238-205ENST00000567549 SH3BP2P78314 561 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 KLRB1Q12918 225 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 NOMO1Q15155 1222 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 FNBP1LQ5T0N5 605 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 PTRH1Q86Y79 214 aaKnown RBP18.2■□□□□ 0.5
LINC01238-205ENST00000567549 TXLNBQ8N3L3 684 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 OR2L2Q8NH16 312 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 ABHD17AQ96GS6 310 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 OXNAD1Q96HP4 312 aaPredicted RBP18.2■□□□□ 0.5
LINC01238-205ENST00000567549 ASB8Q9H765 288 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 SYTL2Q9HCH5 934 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 LHX9Q9NQ69 397 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 CRLS1Q9UJA2 301 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 TMPRSS11EQ9UL52 423 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 PSMD13Q9UNM6 376 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 PCDHA13Q9Y5I0 950 aa18.2■□□□□ 0.5
LINC01238-205ENST00000567549 CCDC66A2RUB6 948 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 PYCARD-AS1I3L0S3 204 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 UGT1A9O60656 530 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 CPNE3O75131 537 aaKnown RBP18.19■□□□□ 0.5
LINC01238-205ENST00000567549 CREG1O75629 220 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 RFPL1O75677 317 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 SRP72O76094 671 aaKnown RBP18.19■□□□□ 0.5
LINC01238-205ENST00000567549 ZBTB11O95625 1053 aaPredicted RBP18.19■□□□□ 0.5
LINC01238-205ENST00000567549 UGT1A6P19224 532 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 ITGALP20701 1170 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 UGT1A1P22309 533 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 UGT1A4P22310 534 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 PBLDP30039 288 aaPredicted RBP18.19■□□□□ 0.5
LINC01238-205ENST00000567549 CHRNA4P43681 627 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 NAP1L1P55209 391 aaKnown RBP18.19■□□□□ 0.5
LINC01238-205ENST00000567549 TBX2Q13207 712 aaPredicted RBP18.19■□□□□ 0.5
LINC01238-205ENST00000567549 DNASE1L3Q13609 305 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 BCL7AQ4VC05 210 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 SARM1Q6SZW1 724 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 THAP4Q8WY91 577 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 ELMO2Q96JJ3 720 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 LINC00615Q96LM1 132 aaPredicted RBP18.19■□□□□ 0.5
LINC01238-205ENST00000567549 C12orf66Q96MD2 445 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 FICDQ9BVA6 458 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 TWSG1Q9GZX9 223 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 UGT1A7Q9HAW7 530 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 UGT1A10Q9HAW8 530 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 UGT1A8Q9HAW9 530 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 FGF21Q9NSA1 209 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 HRASLS2Q9NWW9 162 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 G3BP2Q9UN86 482 aaKnown RBP18.19■□□□□ 0.5
LINC01238-205ENST00000567549 WDR37Q9Y2I8 494 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 KCNMB2Q9Y691 235 aa18.19■□□□□ 0.5
LINC01238-205ENST00000567549 PIPSLA2A3N6 862 aa18.18■□□□□ 0.5
LINC01238-205ENST00000567549 GOLGA6L9A6NEM1 432 aa18.18■□□□□ 0.5
LINC01238-205ENST00000567549 OR5K3A6NET4 321 aa18.18■□□□□ 0.5
LINC01238-205ENST00000567549 IFRD1O00458 451 aaPredicted RBP18.18■□□□□ 0.5
LINC01238-205ENST00000567549 KIF1CO43896 1103 aaKnown RBP18.18■□□□□ 0.5
LINC01238-205ENST00000567549 TJP3O95049 919 aa18.18■□□□□ 0.5
LINC01238-205ENST00000567549 KLK3P07288 261 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms