RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 TEX13BQ9BXU2 312 aa8.2□□□□□ -1.1
NIFKP4-201ENST00000567275 BPIFA1Q9NP55 256 aa8.2□□□□□ -1.1
NIFKP4-201ENST00000567275 PAG1Q9NWQ8 432 aa8.2□□□□□ -1.1
NIFKP4-201ENST00000567275 ORC3Q9UBD5 711 aaPredicted RBP8.2□□□□□ -1.1
NIFKP4-201ENST00000567275 POLG2Q9UHN1 485 aa8.2□□□□□ -1.1
NIFKP4-201ENST00000567275 DDX19BQ9UMR2 479 aa8.2□□□□□ -1.1
NIFKP4-201ENST00000567275 CDC14AQ9UNH5 594 aa8.2□□□□□ -1.1
NIFKP4-201ENST00000567275 ELP1O95163 1332 aa8.2□□□□□ -1.1
NIFKP4-201ENST00000567275 MROH7Q68CQ1 1323 aa8.2□□□□□ -1.1
NIFKP4-201ENST00000567275 LAMA2P24043 3122 aaKnown RBP8.2□□□□□ -1.1
NIFKP4-201ENST00000567275 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 DUSP11O75319 330 aaKnown RBP8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 IGHV4-30-4P0DP06 118 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 AKR1B1P15121 316 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 SSTR2P30874 369 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 NAP1L1P55209 391 aaKnown RBP8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 COASYQ13057 564 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 CALCRLQ16602 461 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 SBK1Q52WX2 424 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 C9orf50Q5SZB4 431 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 HAUS3Q68CZ6 603 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 TDRPQ86YL5 185 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 DHX40Q8IX18 779 aaKnown RBP8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 ANKRD52Q8NB46 1076 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 LILRB1Q8NHL6 650 aaPredicted RBP8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 SNRNP27Q8WVK2 155 aaKnown RBP8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 IGSF21Q96ID5 467 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 IL1RAPL2Q9NP60 686 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 MPP6Q9NZW5 540 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 NYAP2Q9P242 653 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 MALT1Q9UDY8 824 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 SNX9Q9Y5X1 595 aa8.19□□□□□ -1.1
NIFKP4-201ENST00000567275 TTC28Q96AY4 2481 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 PGPEP1LA6NFU8 196 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 SMTNL1A8MU46 457 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 ZBED4O75132 1171 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 GAGE7O76087 117 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 GAGE12FP0CL80 117 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 GAGE12GP0CL81 117 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 GAGE12IP0CL82 117 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 EEF2P13639 858 aaKnown RBP8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 CLNS1AP54105 237 aaKnown RBP8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 EEF1A2Q05639 463 aaKnown RBP8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 GAGE1Q13065 139 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 GAGE4Q13068 117 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 TSTQ16762 297 aaKnown RBP8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 SLC9B1Q4ZJI4 515 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 FAM69AQ5T7M9 428 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 FAM69BQ5VUD6 431 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 C16orf54Q6UWD8 224 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 ZNF114Q8NC26 417 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 KLHDC9Q8NEP7 349 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 DYNLL2Q96FJ2 89 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 SLF1Q9BQI6 1058 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 H2AFJQ9BTM1 129 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 MAGEE1Q9HCI5 957 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 KCND2Q9NZV8 630 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 SLC9A2Q9UBY0 812 aa8.18□□□□□ -1.1
NIFKP4-201ENST00000567275 FSD2A1L4K1 749 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 SRRM3A6NNA2 597 aaPredicted RBP8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 ZNF500O60304 480 aaPredicted RBP8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 USO1O60763 962 aaKnown RBP8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 TMEM63AO94886 807 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 PGK1P00558 417 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 TIMP1P01033 207 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 TFP02787 698 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 MMP2P08253 660 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 FOSL2P15408 326 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 ABCD3P28288 659 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 STX2P32856 288 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 ACLYP53396 1101 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 SNTA1Q13424 505 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 PPIGQ13427 754 aaKnown RBP eCLIP8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 RNPS1Q15287 305 aaKnown RBP8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 TXNDC8Q6A555 127 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 CTR9Q6PD62 1173 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 ARMC8Q8IUR7 673 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 BEST2Q8NFU1 509 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 KLHL29Q96CT2 875 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 ERP27Q96DN0 273 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 SCMH1Q96GD3 660 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 GLT1D1Q96MS3 346 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 TREX2Q9BQ50 279 aaPredicted RBP8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 UPF3AQ9H1J1 476 aaKnown RBP8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 PLSCR4Q9NRQ2 329 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 SLCO3A1Q9UIG8 710 aa8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 ATXN2Q99700 1313 aaKnown RBP8.17□□□□□ -1.1
NIFKP4-201ENST00000567275 SLC16A5O15375 505 aa8.16□□□□□ -1.1
NIFKP4-201ENST00000567275 PRKAB2O43741 272 aa8.16□□□□□ -1.1
NIFKP4-201ENST00000567275 CABYRO75952 493 aa8.16□□□□□ -1.1
NIFKP4-201ENST00000567275 SNAI1O95863 264 aaPredicted RBP8.16□□□□□ -1.1
NIFKP4-201ENST00000567275 ZFYP08048 801 aaPredicted RBP8.16□□□□□ -1.1
NIFKP4-201ENST00000567275 AGAP20933 346 aa8.16□□□□□ -1.1
NIFKP4-201ENST00000567275 HNRNPH1P31943 449 aaKnown RBP8.16□□□□□ -1.1
NIFKP4-201ENST00000567275 DLG1Q12959 904 aa8.16□□□□□ -1.1
NIFKP4-201ENST00000567275 PARP14Q460N5 1801 aa8.16□□□□□ -1.1
NIFKP4-201ENST00000567275 MMEL1Q495T6 779 aa8.16□□□□□ -1.1
NIFKP4-201ENST00000567275 PPP6R3Q5H9R7 873 aaPredicted RBP8.16□□□□□ -1.1
NIFKP4-201ENST00000567275 GMCL1P1Q8NEA9 526 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms