RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 RANBP10Q6VN20 620 aa14.66□□□□□ -0.06
RNF40-209ENST00000566703 FAM83HQ6ZRV2 1179 aaPredicted RBP14.66□□□□□ -0.06
RNF40-209ENST00000566703 BBS12Q6ZW61 710 aa14.66□□□□□ -0.06
RNF40-209ENST00000566703 D2HGDHQ8N465 521 aa14.66□□□□□ -0.06
RNF40-209ENST00000566703 OR2L2Q8NH16 312 aa14.66□□□□□ -0.06
RNF40-209ENST00000566703 OR8K5Q8NH50 307 aa14.66□□□□□ -0.06
RNF40-209ENST00000566703 ELMO2Q96JJ3 720 aa14.66□□□□□ -0.06
RNF40-209ENST00000566703 CALR3Q96L12 384 aaKnown RBP14.66□□□□□ -0.06
RNF40-209ENST00000566703 LINC00615Q96LM1 132 aaPredicted RBP14.66□□□□□ -0.06
RNF40-209ENST00000566703 FSD1LQ9BXM9 530 aa14.66□□□□□ -0.06
RNF40-209ENST00000566703 GPR87Q9BY21 358 aa14.66□□□□□ -0.06
RNF40-209ENST00000566703 RSPH14Q9UHP6 348 aa14.66□□□□□ -0.06
RNF40-209ENST00000566703 PIPSLA2A3N6 862 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 OR5K3A6NET4 321 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 TLCD2A6NGC4 264 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 OR2AG2A6NM03 316 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 APOC4-APOC2K7ER74 178 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 APOC2P02655 101 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 FOLR1P15328 257 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 CA5AP35218 305 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 ARL4DP49703 201 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 HSD11B2P80365 405 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 PDE1BQ01064 536 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 TUBB3Q13509 450 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 PLCL1Q15111 1095 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 BCL7AQ4VC05 210 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 FNBP1LQ5T0N5 605 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 ATP1A1-AS1Q5TC04 95 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 ITPRIPL1Q6GPH6 555 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 PWWP2BQ6NUJ5 590 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 C11orf63Q6NUN7 778 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 CCDC50Q8IVM0 306 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 APLFQ8IW19 511 aaPredicted RBP14.65□□□□□ -0.06
RNF40-209ENST00000566703 CCDC170Q8IYT3 715 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 GPR150Q8NGU9 434 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 HEXDCQ8WVB3 486 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 THAP4Q8WY91 577 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 MAP3K3Q99759 626 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 GBA3Q9H227 469 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 TSPY26PQ9H489 355 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 LUC7LQ9NQ29 371 aaKnown RBP14.65□□□□□ -0.06
RNF40-209ENST00000566703 FGF21Q9NSA1 209 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 HRASLS2Q9NWW9 162 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 PSMD13Q9UNM6 376 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 AAR2Q9Y312 384 aaKnown RBP14.65□□□□□ -0.06
RNF40-209ENST00000566703 COLEC10Q9Y6Z7 277 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 SPTA1P02549 2419 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 MYO18BQ8IUG5 2567 aa14.65□□□□□ -0.06
RNF40-209ENST00000566703 UBA6A0AVT1 1052 aaPredicted RBP14.64□□□□□ -0.07
RNF40-209ENST00000566703 AGAP14A8MT82 685 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 H7C0C1 242 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 BUD23O43709 281 aaKnown RBP14.64□□□□□ -0.07
RNF40-209ENST00000566703 SRP72O76094 671 aaKnown RBP14.64□□□□□ -0.07
RNF40-209ENST00000566703 ZBTB11O95625 1053 aaPredicted RBP14.64□□□□□ -0.07
RNF40-209ENST00000566703 AGTP01019 485 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 FURINP09958 794 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 NDUFS1P28331 727 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 RBL1P28749 1068 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 AKT1P31749 480 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 ATP5OP48047 213 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 PMS2P54278 862 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 UBAP2LQ14157 1087 aaKnown RBP14.64□□□□□ -0.07
RNF40-209ENST00000566703 PRPSAP1Q14558 356 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 DNTTIP2Q5QJE6 756 aaKnown RBP14.64□□□□□ -0.07
RNF40-209ENST00000566703 ARMC6Q6NXE6 501 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 OOSP2Q86WS3 158 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 CT55Q8WUE5 264 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 C12orf66Q96MD2 445 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 PPP1R2P1Q96PQ5 205 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 INSM2Q96T92 566 aaPredicted RBP14.64□□□□□ -0.07
RNF40-209ENST00000566703 CCM2Q9BSQ5 444 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 TWSG1Q9GZX9 223 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 ASB8Q9H765 288 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 KIR3DX1Q9H7L2 352 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 LATS2Q9NRM7 1088 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 IMP3Q9NV31 184 aaKnown RBP14.64□□□□□ -0.07
RNF40-209ENST00000566703 SLC24A2Q9UI40 661 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 TP53TG5Q9Y2B4 290 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 PCDHA13Q9Y5I0 950 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 HEBP2Q9Y5Z4 205 aa14.64□□□□□ -0.07
RNF40-209ENST00000566703 C17orf113A0A1B0GUU1 675 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 CDC14CA4D256 554 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 GPR39O43194 453 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 RFPL1O75677 317 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 ZNF189O75820 626 aaPredicted RBP14.63□□□□□ -0.07
RNF40-209ENST00000566703 TIAF1O95411 115 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 PRAMEF1O95521 474 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 CRTAMO95727 393 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 RALBP11234 206 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 PTPN4P29074 926 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 ADRA1AP35348 466 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 PPP1CAP62136 330 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 RPS15P62841 145 aaKnown RBP14.63□□□□□ -0.07
RNF40-209ENST00000566703 TUBB4BP68371 445 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 SEMA5AQ13591 1074 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 TUBB2AQ13885 445 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 SPA17Q15506 151 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 TMTC4Q5T4D3 741 aa14.63□□□□□ -0.07
RNF40-209ENST00000566703 CAPRIN2Q6IMN6 1127 aaKnown RBP14.63□□□□□ -0.07
RNF40-209ENST00000566703 SYVN1Q86TM6 617 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms