RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SLC12A4Q9UP95 1085 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 ST14Q9Y5Y6 855 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 PRSS21Q9Y6M0 314 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 CSNK1G3Q9Y6M4 447 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 DNAH14Q0VDD8 3507 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 ARHGEF17Q96PE2 2063 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-206ENST00000565990 ARID1BQ8NFD5 2236 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-206ENST00000565990 LNP1A1A4G5 178 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 KLHL33A6NCF5 533 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 PRR19A6NJB7 356 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 CXorf49A8MYA2 514 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-206ENST00000565990 PRMT5O14744 637 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-206ENST00000565990 YKT6O15498 198 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 PCDHGA12O60330 932 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 SNX3O60493 162 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 ESR1P03372 595 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 GSTM1P09488 218 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 JUNDP17535 347 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 PMLP29590 882 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 STX2P32856 288 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 PHBP35232 272 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 SLC1A2P43004 574 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 GTF2A1P52655 376 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-206ENST00000565990 CTSCP53634 463 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 HNRNPKP61978 463 aaKnown RBP eCLIP12.42□□□□□ -0.42
SF3B3-206ENST00000565990 GSTM4Q03013 218 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 ILF2Q12905 390 aaKnown RBP12.42□□□□□ -0.42
SF3B3-206ENST00000565990 ZNF658BQ4V348 819 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-206ENST00000565990 ZNF542PQ5EBM4 170 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 TCEAL6Q6IPX3 200 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 TRPM8Q7Z2W7 1104 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 CCDC91Q7Z6B0 441 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 HID1Q8IV36 788 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 PHACTR4Q8IZ21 702 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 SLC25A45Q8N413 288 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 DCLK2Q8N568 766 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 CLDN19Q8N6F1 224 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 EPS8L3Q8TE67 593 aaKnown RBP12.42□□□□□ -0.42
SF3B3-206ENST00000565990 SAP25Q8TEE9 199 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 FBF1Q8TES7 1133 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 TCEAL3Q969E4 200 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 PDXPQ96GD0 296 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 MAGEB18Q96M61 343 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 SLC13A1Q9BZW2 595 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 TMEM168Q9H0V1 697 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 TCEAL2Q9H3H9 227 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-206ENST00000565990 RABEP2Q9H5N1 569 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 ACSS3Q9H6R3 686 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 VPS37BQ9H9H4 285 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 CARS2Q9HA77 564 aaKnown RBP12.42□□□□□ -0.42
SF3B3-206ENST00000565990 IL21RQ9HBE5 538 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 SLC40A1Q9NP59 571 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 LATS2Q9NRM7 1088 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 DNAJC28Q9NX36 388 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 NSMCE4AQ9NXX6 385 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 EURLQ9NYK6 297 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 GULP1Q9UBP9 304 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 ZNHIT2Q9UHR6 403 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 SLC24A2Q9UI40 661 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 PCDHB1Q9Y5F3 818 aa12.42□□□□□ -0.42
SF3B3-206ENST00000565990 ZFHX2Q9C0A1 2572 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-206ENST00000565990 ANKRD65E5RJM6 399 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 QSOX1O00391 747 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 PRPF4O43172 522 aaKnown RBP eCLIP12.41□□□□□ -0.42
SF3B3-206ENST00000565990 POP7O75817 140 aaKnown RBP12.41□□□□□ -0.42
SF3B3-206ENST00000565990 PIAS2O75928 621 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 ATP5HO75947 161 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 CER1O95813 267 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 GIMD1P0DJR0 217 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 CD9P21926 228 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 DGKAP23743 735 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 AKT1P31749 480 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 GNPDA1P46926 289 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 PRLHRP49683 370 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 DMPKQ09013 629 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 BNIP3Q12983 259 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 NAB1Q13506 487 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 GTF2H3Q13889 308 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 LRP8Q14114 963 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 SF3A2Q15428 464 aaKnown RBP12.41□□□□□ -0.42
SF3B3-206ENST00000565990 KBTBD12Q3ZCT8 623 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 ZNF549Q6P9A3 640 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 DOK6Q6PKX4 331 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 LVRNQ6Q4G3 990 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 XKR5Q6UX68 686 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 CAPN12Q6ZSI9 719 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 RD3Q7Z3Z2 195 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 LRRTM4Q86VH4 590 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 NRROSQ86YC3 692 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 LRRC34Q8IZ02 419 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 FSTL5Q8N475 847 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-206ENST00000565990 DYDC1Q8WWB3 177 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 CDKL2Q92772 493 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 CYTH2Q99418 400 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 TIMM29Q9BSF4 260 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 CCM2Q9BSQ5 444 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 CLPBQ9H078 707 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 CAAP1Q9H8G2 361 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 NKIRAS1Q9NYS0 192 aa12.41□□□□□ -0.42
SF3B3-206ENST00000565990 ZFATQ9P243 1243 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms