RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 PLIN5Q00G26 463 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 SNTB1Q13884 538 aaKnown RBP4.3□□□□□ -1.72
CHD9-215ENST00000565442 GTF2H2Q13888 395 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 IL11RAQ14626 422 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 MELKQ14680 651 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 SNAPC1Q16533 368 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 LETM2Q2VYF4 491 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 C9orf50Q5SZB4 431 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 IRAK1BP1Q5VVH5 260 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 NADSYN1Q6IA69 706 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 GTF2H2CQ6P1K8 395 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 ASB18Q6ZVZ8 466 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 C16orf82Q7Z2V1 217 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 TICAM2Q86XR7 235 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.3□□□□□ -1.72
CHD9-215ENST00000565442 AFAP1Q8N556 730 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 GBGT1Q8N5D6 347 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 RADILQ96JH8 1075 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 FAM84BQ96KN1 310 aaPredicted RBP4.3□□□□□ -1.72
CHD9-215ENST00000565442 SLC22A12Q96S37 553 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 SYT17Q9BSW7 474 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 MBNL1Q9NR56 388 aaKnown RBP4.3□□□□□ -1.72
CHD9-215ENST00000565442 TCP11L1Q9NUJ3 509 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 HAO2Q9NYQ3 351 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 BCCIPQ9P287 314 aaKnown RBP eCLIP4.3□□□□□ -1.72
CHD9-215ENST00000565442 WDR35Q9P2L0 1181 aa4.3□□□□□ -1.72
CHD9-215ENST00000565442 CFDP1Q9UEE9 299 aaPredicted RBP4.3□□□□□ -1.72
CHD9-215ENST00000565442 PLSCR5A0PG75 271 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 EIF3DO15371 548 aaKnown RBP eCLIP4.29□□□□□ -1.72
CHD9-215ENST00000565442 ZNHIT1O43257 154 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 ZNF500O60304 480 aaPredicted RBP4.29□□□□□ -1.72
CHD9-215ENST00000565442 PRAMEF11O60813 436 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 DKC1O60832 514 aaKnown RBP eCLIP4.29□□□□□ -1.72
CHD9-215ENST00000565442 WDR1O75083 606 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 BMP10O95393 424 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 KRT19P08727 400 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 FAM106CPP0CH98 169 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 CDH1P12830 882 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 ART1P52961 327 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 ALCAMQ13740 583 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 KYNUQ16719 465 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 IZUMO4Q1ZYL8 232 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 KIF19Q2TAC6 998 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 RAB6CQ53S08 254 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 C6orf163Q5TEZ5 329 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 C9orf57Q5W0N0 161 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 PRSS57Q6UWY2 283 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 ZNF704Q6ZNC4 412 aaPredicted RBP4.29□□□□□ -1.72
CHD9-215ENST00000565442 KMT5CQ86Y97 462 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 KCNH5Q8NCM2 988 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 CFAP61Q8NHU2 1237 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 DNASE2BQ8WZ79 361 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 PHF21AQ96BD5 680 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 ERLEC1Q96DZ1 483 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 OXNAD1Q96HP4 312 aaPredicted RBP4.29□□□□□ -1.72
CHD9-215ENST00000565442 PRMT6Q96LA8 375 aaPredicted RBP4.29□□□□□ -1.72
CHD9-215ENST00000565442 FAM81BQ96LP2 452 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 TTC14Q96N46 770 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 ZNF582Q96NG8 517 aaPredicted RBP4.29□□□□□ -1.72
CHD9-215ENST00000565442 RAB6CQ9H0N0 254 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 OR10A4Q9H209 315 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 C6orf106Q9H6K1 298 aaPredicted RBP4.29□□□□□ -1.72
CHD9-215ENST00000565442 SLA2Q9H6Q3 261 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 SELENONQ9NZV5 590 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 GIMAP2Q9UG22 337 aa4.29□□□□□ -1.72
CHD9-215ENST00000565442 CGNL1Q0VF96 1302 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 ZCWPW2A0A1B0GU75 182 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 TRBC2A0A5B9 178 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 URADA6NGE7 173 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 TSPY2A6NKD2 308 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 TO15178 435 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 IPO8O15397 1037 aaKnown RBP4.28□□□□□ -1.72
CHD9-215ENST00000565442 SSX4O60224 188 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 DIAPH2O60879 1101 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 TADA2AO75478 443 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 GGPS1O95749 300 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 APOA4P06727 396 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 TSPY3P0CV98 308 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 TSPY8P0CW00 308 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 MYBL1P10243 752 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 CPT2P23786 658 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 TSPY1Q01534 308 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 TROAPQ12815 778 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 GAGE2BQ13066 116 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 PLA2G7Q13093 441 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 KEAP1Q14145 624 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 GAGE2EQ4V326 116 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 CBWD6Q4V339 395 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 CBWD3Q5JTY5 395 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 C1orf141Q5JVX7 400 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 STXBP5Q5T5C0 1151 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 GAGE2AQ6NT46 116 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 FBXL22Q6P050 247 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 FAM171BQ6P995 826 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 FIGLAQ6QHK4 219 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.28□□□□□ -1.72
CHD9-215ENST00000565442 CAMKMTQ7Z624 323 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 RBM23Q86U06 439 aaKnown RBP4.28□□□□□ -1.72
CHD9-215ENST00000565442 ZNF595Q8IYB9 648 aa4.28□□□□□ -1.72
CHD9-215ENST00000565442 TDRD5Q8NAT2 981 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms