RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 SAMD4AQ9UPU9 718 aaKnown RBP7.54□□□□□ -1.2
ATXN3-249ENST00000564606 B3GNT3Q9Y2A9 372 aa7.54□□□□□ -1.2
ATXN3-249ENST00000564606 TPRKBQ9Y3C4 175 aa7.54□□□□□ -1.2
ATXN3-249ENST00000564606 RNF11Q9Y3C5 154 aa7.54□□□□□ -1.2
ATXN3-249ENST00000564606 PCDHB7Q9Y5E2 793 aa7.54□□□□□ -1.2
ATXN3-249ENST00000564606 EP400Q96L91 3159 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ATP6AP2A0A1C7CYW4 349 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ANKRD66B4E2M5 251 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 G3V2T6 193 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 H3BSA7 217 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 KPNA4O00629 521 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 UBFD1O14562 309 aaKnown RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 PRMT3O60678 531 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 SOCS5O75159 536 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ULK1O75385 1050 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ATP6AP2O75787 350 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 UPP2O95045 317 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ADH1BP00325 375 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 GLUD1P00367 558 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 NTRK1P04629 796 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ANXA5P08758 320 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ZDHHC11BP0C7U3 371 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 CYBAP13498 195 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 MTHFD2P13995 350 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 EPB42P16452 691 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 CAPN3P20807 821 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 KCNA5P22460 613 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 YY1P25490 414 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 PTX3P26022 381 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 VARSP26640 1264 aaKnown RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 GSTM2P28161 218 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 MSX2P35548 267 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 CASP2P42575 452 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 RANBP1P43487 201 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 GNPDA1P46926 289 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 CSNK1DP48730 415 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 HNMTP50135 292 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 SCNN1BP51168 640 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 CCR3P51677 355 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ATXN3P54252 364 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ARSFP54793 590 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 CDH13P55290 713 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 C21orf59P57076 290 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 PHEXP78562 749 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 TAF10Q12962 218 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 PLD1Q13393 1074 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 TMED1Q13445 227 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 KRR1Q13601 381 aaKnown RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 GTF2H2Q13888 395 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 MRPL58Q14197 206 aaKnown RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 TGFBIQ15582 683 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 C10orf62Q5T681 223 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ARMC12Q5T9G4 340 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 NANOGP8Q6NSW7 305 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 GTF2H2CQ6P1K8 395 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 C16orf87Q6PH81 154 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 IL27RAQ6UWB1 636 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 CXCL17Q6UXB2 119 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ZNF554Q86TJ5 538 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 MIB1Q86YT6 1006 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 CBARPQ8N350 705 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 METTL25Q8N6Q8 603 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 FAM156AQ8NDB6 213 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 VPS37AQ8NEZ2 397 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 OR2T12Q8NG77 320 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 OR4K2Q8NGD2 314 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 OR5K1Q8NHB7 308 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 DNAJB14Q8TBM8 379 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 FNDC8Q8TC99 324 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 MAGEE2Q8TD90 523 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 GAB3Q8WWW8 586 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 FAM162AQ96A26 154 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 SLCO4A1Q96BD0 722 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 TBC1D20Q96BZ9 403 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 BIRC7Q96CA5 298 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ITPKCQ96DU7 683 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 LINGO1Q96FE5 620 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ITCHQ96J02 903 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 KLHL5Q96PQ7 755 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 CGREF1Q99674 301 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 GPR21Q99679 349 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 APOL4Q9BPW4 351 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 SPON2Q9BUD6 331 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 C2orf49Q9BVC5 232 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 CHID1Q9BWS9 393 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 EMILIN2Q9BXX0 1053 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 MUC3BQ9H195 1237 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 NANOGQ9H9S0 305 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 GPN2Q9H9Y4 310 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 IL1RL2Q9HB29 575 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 PDFQ9HBH1 243 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 TMEM30AQ9NV96 361 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 SMOXQ9NWM0 555 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 CMTM6Q9NX76 183 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 FKBPLQ9UIM3 349 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 LSM7Q9UK45 103 aaKnown RBP7.53□□□□□ -1.2
ATXN3-249ENST00000564606 ERVW-1Q9UQF0 538 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 FAM50BQ9Y247 325 aa7.53□□□□□ -1.2
ATXN3-249ENST00000564606 OARD1Q9Y530 152 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms