RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 RSC1A1Q92681 617 aa14.69□□□□□ -0.06
SPG7-210ENST00000564409 LINC00615Q96LM1 132 aaPredicted RBP14.69□□□□□ -0.06
SPG7-210ENST00000564409 SPATA13Q96N96 652 aa14.69□□□□□ -0.06
SPG7-210ENST00000564409 OR6C1Q96RD1 312 aa14.69□□□□□ -0.06
SPG7-210ENST00000564409 CCM2Q9BSQ5 444 aa14.69□□□□□ -0.06
SPG7-210ENST00000564409 PDE7BQ9NP56 450 aa14.69□□□□□ -0.06
SPG7-210ENST00000564409 KCND3Q9UK17 655 aa14.69□□□□□ -0.06
SPG7-210ENST00000564409 TFR2Q9UP52 801 aa14.69□□□□□ -0.06
SPG7-210ENST00000564409 PCDHB3Q9Y5E6 796 aa14.69□□□□□ -0.06
SPG7-210ENST00000564409 ARL5AQ9Y689 179 aa14.69□□□□□ -0.06
SPG7-210ENST00000564409 RPS6KL1Q9Y6S9 549 aa14.69□□□□□ -0.06
SPG7-210ENST00000564409 PIKFYVEQ9Y2I7 2098 aa14.69□□□□□ -0.06
SPG7-210ENST00000564409 MACROD2A1Z1Q3 448 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 GOLGA6L9A6NEM1 432 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 SOWAHDA6NJG2 315 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 CFAP99D6REC4 459 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 F5H423 210 aaPredicted RBP14.68□□□□□ -0.06
SPG7-210ENST00000564409 KCNN4O15554 427 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 SUV39H1O43463 412 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 BUD23O43709 281 aaKnown RBP14.68□□□□□ -0.06
SPG7-210ENST00000564409 WISP1O95388 367 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 CCNYL3P0C7X3 344 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 MTHFD1P11586 935 aaKnown RBP14.68□□□□□ -0.06
SPG7-210ENST00000564409 NDUFS1P28331 727 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 SEPHS1P49903 392 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 CSRP3P50461 194 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 ZNF75DP51815 510 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 POLE2P56282 527 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 KCNC4Q03721 635 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 CDC20Q12834 499 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 KCNAB2Q13303 367 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 NFE2L1Q14494 772 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 GPR33Q49SQ1 333 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 FNBP1LQ5T0N5 605 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 IRGCQ6NXR0 463 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 PPP1R3BQ86XI6 285 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 RASGRP3Q8IV61 690 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 KLHDC8BQ8IXV7 354 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 UBE2Q2Q8WVN8 375 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 DCUN1D1Q96GG9 259 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 SLC41A2Q96JW4 573 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 GORASP1Q9BQQ3 440 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 CLMPQ9H6B4 373 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 ASB8Q9H765 288 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 TRIM10Q9UDY6 481 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 HEBP2Q9Y5Z4 205 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 COLEC10Q9Y6Z7 277 aa14.68□□□□□ -0.06
SPG7-210ENST00000564409 C17orf113A0A1B0GUU1 675 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 RCCD1A6NED2 376 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 TLCD2A6NGC4 264 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 MIF4GDA9UHW6 222 aaKnown RBP14.67□□□□□ -0.06
SPG7-210ENST00000564409 SLC35G4P0C7Q5 338 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 TCN2P20062 427 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 PSMB4P28070 264 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 VAV2P52735 878 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 ACY1Q03154 408 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 PLCL1Q15111 1095 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 FAM83HQ6ZRV2 1179 aaPredicted RBP14.67□□□□□ -0.06
SPG7-210ENST00000564409 SYCE1Q8N0S2 351 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 UBL4BQ8N7F7 174 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 LRRC57Q8N9N7 239 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 SIDT2Q8NBJ9 832 aaKnown RBP14.67□□□□□ -0.06
SPG7-210ENST00000564409 OR8K5Q8NH50 307 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 APOBEC4Q8WW27 367 aaKnown RBP14.67□□□□□ -0.06
SPG7-210ENST00000564409 STARD8Q92502 1023 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 SEC14L1Q92503 715 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 STAMBPL1Q96FJ0 436 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 VPS37BQ9H9H4 285 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 PADI1Q9ULC6 663 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 KCTD3Q9Y597 815 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 DUSP10Q9Y6W6 482 aa14.67□□□□□ -0.06
SPG7-210ENST00000564409 OR5K3A6NET4 321 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 MATN2O00339 956 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 TERTO14746 1132 aaKnown RBP14.66□□□□□ -0.06
SPG7-210ENST00000564409 NKX2-8O15522 239 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 PSMD3O43242 534 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 KIF1CO43896 1103 aaKnown RBP14.66□□□□□ -0.06
SPG7-210ENST00000564409 SPAG6O75602 509 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 KIAA0754O94854 1291 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 PTMAP06454 111 aaKnown RBP14.66□□□□□ -0.06
SPG7-210ENST00000564409 GSTM1P09488 218 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 ITGALP20701 1170 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 SH3BP2P78314 561 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 XIAPP98170 497 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 GSTM4Q03013 218 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 MSLNQ13421 630 aaPredicted RBP14.66□□□□□ -0.06
SPG7-210ENST00000564409 SEPT6Q14141 434 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 PARP6Q2NL67 630 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 ARMC6Q6NXE6 501 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 ZNF449Q6P9G9 518 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 FAM92BQ6ZTR7 304 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 SNX20Q7Z614 316 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 OOSP2Q86WS3 158 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 NXPE1Q8N323 547 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 GPR150Q8NGU9 434 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 HM13Q8TCT9 377 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 ALG3Q92685 438 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 COPS8Q99627 209 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 TBL1YQ9BQ87 522 aa14.66□□□□□ -0.06
SPG7-210ENST00000564409 KIR3DX1Q9H7L2 352 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms