RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 SNX29P2Q8IUI4 249 aa10.94□□□□□ -0.66
TCF4-222ENST00000564228 CENPLQ8N0S6 344 aaPredicted RBP10.94□□□□□ -0.66
TCF4-222ENST00000564228 CHDHQ8NE62 594 aaPredicted RBP10.94□□□□□ -0.66
TCF4-222ENST00000564228 BPIFB1Q8TDL5 484 aa10.94□□□□□ -0.66
TCF4-222ENST00000564228 HCAR2Q8TDS4 363 aa10.94□□□□□ -0.66
TCF4-222ENST00000564228 LRRN4Q8WUT4 740 aa10.94□□□□□ -0.66
TCF4-222ENST00000564228 TTC9Q92623 222 aa10.94□□□□□ -0.66
TCF4-222ENST00000564228 AGAP2Q99490 1192 aa10.94□□□□□ -0.66
TCF4-222ENST00000564228 FEM1AQ9BSK4 669 aa10.94□□□□□ -0.66
TCF4-222ENST00000564228 TRIM54Q9BYV2 358 aa10.94□□□□□ -0.66
TCF4-222ENST00000564228 SOX17Q9H6I2 414 aaPredicted RBP10.94□□□□□ -0.66
TCF4-222ENST00000564228 NGRNQ9NPE2 291 aaKnown RBP10.94□□□□□ -0.66
TCF4-222ENST00000564228 RCOR3Q9P2K3 495 aaPredicted RBP10.94□□□□□ -0.66
TCF4-222ENST00000564228 GMPR2Q9P2T1 348 aaKnown RBP10.94□□□□□ -0.66
TCF4-222ENST00000564228 SLC39A10Q9ULF5 831 aa10.94□□□□□ -0.66
TCF4-222ENST00000564228 MTCL1Q9Y4B5 1905 aaKnown RBP10.93□□□□□ -0.66
TCF4-222ENST00000564228 YJEFN3A6XGL0 299 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 SYCE1LA8MT33 242 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 MAN1A2O60476 641 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 ARHGEF15O94989 841 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 KCNK2O95069 426 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 SEC24AO95486 1093 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 NDST3O95803 873 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 GPX3P22352 226 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 PSMB4P28070 264 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 MAGEA11P43364 429 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 NKX2-5P52952 324 aaPredicted RBP10.93□□□□□ -0.66
TCF4-222ENST00000564228 PRPSAP1Q14558 356 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 DPY19L1Q2PZI1 675 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 CCDC58Q4VC31 144 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 PITRM1Q5JRX3 1037 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 RSBN1Q5VWQ0 802 aaPredicted RBP10.93□□□□□ -0.66
TCF4-222ENST00000564228 BSPRYQ5W0U4 402 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 TMC5Q6UXY8 1006 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 ZC3HC1Q86WB0 502 aaKnown RBP10.93□□□□□ -0.66
TCF4-222ENST00000564228 FUNDC1Q8IVP5 155 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 KCTD4Q8WVF5 259 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 NACC2Q96BF6 587 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 GPR78Q96P69 363 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 CSPG4P5Q96PW8 444 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 CDK5RAP1Q96SZ6 601 aaKnown RBP10.93□□□□□ -0.66
TCF4-222ENST00000564228 SLC30A3Q99726 388 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 MRPL57Q9BQC6 102 aaKnown RBP10.93□□□□□ -0.66
TCF4-222ENST00000564228 SLC39A3Q9BRY0 314 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 REPIN1Q9BWE0 567 aaKnown RBP10.93□□□□□ -0.66
TCF4-222ENST00000564228 ZBP1Q9H171 429 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 ADNPQ9H2P0 1102 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 DSN1Q9H410 356 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 CASS4Q9NQ75 786 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 ACSS2Q9NR19 701 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 CMTM6Q9NX76 183 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.93□□□□□ -0.66
TCF4-222ENST00000564228 MAP10Q9P2G4 905 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 VANGL2Q9ULK5 521 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 ACOT9Q9Y305 439 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 PMF1-BGLAPU3KQ54 211 aa10.93□□□□□ -0.66
TCF4-222ENST00000564228 GRXCR2A6NFK2 248 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 ERI2A8K979 691 aaKnown RBP10.92□□□□□ -0.66
TCF4-222ENST00000564228 UBXN8O00124 270 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 FXYD1O00168 92 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 TOR1BO14657 336 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 TNFRSF10BO14763 440 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 INPP4BO15327 924 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 SUPT7LO94864 414 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 ALPLP05186 524 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 CA3P07451 260 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 HAPLN1P10915 354 aaPredicted RBP10.92□□□□□ -0.66
TCF4-222ENST00000564228 M6PRP20645 277 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 ACVR2AP27037 513 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 SCNN1AP37088 669 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 TUBA1BP68363 451 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 USP10Q14694 798 aaKnown RBP10.92□□□□□ -0.66
TCF4-222ENST00000564228 MAPK11Q15759 364 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 FXNQ16595 210 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 UGP2Q16851 508 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 ADPRMQ3LIE5 342 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 LARP4Q71RC2 724 aaKnown RBP eCLIP10.92□□□□□ -0.66
TCF4-222ENST00000564228 TUBA1AQ71U36 451 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 DEFB106AQ8N104 65 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 KIAA1958Q8N8K9 716 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 TXNDC5Q8NBS9 432 aaKnown RBP10.92□□□□□ -0.66
TCF4-222ENST00000564228 C2orf15Q8WU43 125 aaKnown RBP10.92□□□□□ -0.66
TCF4-222ENST00000564228 TSPEARQ8WU66 669 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 ZNF566Q969W8 418 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 YIPF6Q96EC8 236 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 EGLN2Q96KS0 407 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 C8orf48Q96LL4 319 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 NODALQ96S42 347 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 DGCR6LQ9BY27 220 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 OSBPL2Q9H1P3 480 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 POMKQ9H5K3 350 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 POLE4Q9NR33 117 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 EGFL7Q9UHF1 273 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 ZNF221Q9UK13 617 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 STAP1Q9ULZ2 295 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 PCDHA9Q9Y5H5 950 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 CHD9Q3L8U1 2897 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 SYNJ2BP-COX16A0A087WUM0 186 aa10.92□□□□□ -0.66
TCF4-222ENST00000564228 TYW5A2RUC4 315 aaKnown RBP10.92□□□□□ -0.66
TCF4-222ENST00000564228 A6NL46 340 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms