RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 FAM234BA2RU67 622 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 TMEM88BA6NKF7 163 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 SLC7A4O43246 635 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 SUV39H1O43463 412 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 PSIP1O75475 530 aaKnown RBP12.46□□□□□ -0.41
COMMD4-209ENST00000564068 ALDH1A2O94788 518 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 FGF1P05230 155 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 C8BP07358 591 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 BMP2P12643 396 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 MYF6P23409 242 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 GTF2E2P29084 291 aaKnown RBP12.46□□□□□ -0.41
COMMD4-209ENST00000564068 RFC2P35250 354 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 MAP2K4P45985 399 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 BRCC3P46736 316 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 ERVK-8P63133 956 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 CLDN10P78369 228 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 CYP4F8P98187 520 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 CTXN3Q4LDR2 81 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 TPRG1LQ5T0D9 272 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 ZNF544Q6NX49 715 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 DEPDC4Q8N2C3 294 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 TMEM86AQ8N2M4 240 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 MINDY2Q8NBR6 621 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 ARNTL2Q8WYA1 636 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 PCED1BQ96HM7 432 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 ITCHQ96J02 903 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 TM6SF2Q9BZW4 377 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 ATP6V1HQ9UI12 483 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 PCDHGB5Q9Y5G0 923 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 PPP2R3BQ9Y5P8 575 aa12.46□□□□□ -0.41
COMMD4-209ENST00000564068 TUBGCP6Q96RT7 1819 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 CXCL11O14625 94 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 TLR5O60602 858 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 RPP40O75818 363 aaKnown RBP12.46□□□□□ -0.42
COMMD4-209ENST00000564068 SCELO95171 688 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 HLA-DQB2P05538 268 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 ANXA5P08758 320 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 LPOP22079 712 aaPredicted RBP12.46□□□□□ -0.42
COMMD4-209ENST00000564068 TMPRSS11AQ6ZMR5 421 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 PTCHD4Q6ZW05 846 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 GPR65Q8IYL9 337 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 SCML4Q8N228 414 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 OR5K1Q8NHB7 308 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 DIRAS2Q96HU8 199 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 FCRL5Q96RD9 977 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 SLC9A7Q96T83 725 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 RNF11Q9Y3C5 154 aa12.46□□□□□ -0.42
COMMD4-209ENST00000564068 PRRC2BQ5JSZ5 2229 aaKnown RBP12.46□□□□□ -0.42
COMMD4-209ENST00000564068 ILVBLA1L0T0 632 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 SOWAHBA6NEL2 793 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 PDHXO00330 501 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 SEMA3DO95025 777 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 MBL2P11226 248 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-209ENST00000564068 ARSAP15289 507 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 ALDH9A1P49189 494 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 TUFMP49411 452 aaKnown RBP12.45□□□□□ -0.42
COMMD4-209ENST00000564068 PTPRCAPQ14761 206 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 TIGD6Q17RP2 521 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 GPR156Q8NFN8 814 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 OLAHQ9NV23 265 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 PEX16Q9Y5Y5 336 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 ARL5AQ9Y689 179 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 GLI3P10071 1580 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 CTPS1P17812 591 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 ITIH1P19827 911 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 DGKAP23743 735 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 OLR1P78380 273 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 NFE2Q16621 373 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-209ENST00000564068 MZT2BQ6NZ67 158 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 CYP20A1Q6UW02 462 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 NEK10Q6ZWH5 1172 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 LRRC49Q8IUZ0 686 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 PSMG2Q969U7 264 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 RTP4Q96DX8 246 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 C1GALT1C1Q96EU7 318 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 TMEM209Q96SK2 561 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 INTS7Q9NVH2 962 aaKnown RBP12.45□□□□□ -0.42
COMMD4-209ENST00000564068 TRPC4Q9UBN4 977 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 TESMINQ9Y4I5 508 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 BTN3A3O00478 584 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 RGS20O76081 388 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 ARIH2O95376 493 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 ZNF26P17031 533 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-209ENST00000564068 PBLDP30039 288 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-209ENST00000564068 GPC1P35052 558 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 ZNF404Q494X3 552 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 LIX1Q8N485 282 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 CNPPD1Q9BV87 410 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 KIFC1Q9BW19 673 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 MIEF1Q9NQG6 463 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 SLC28A1O00337 649 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 HAT1O14929 419 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 AP2A2O94973 939 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 INMTO95050 263 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 OXTRP30559 389 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 PAFAH1B3Q15102 231 aaKnown RBP12.45□□□□□ -0.42
COMMD4-209ENST00000564068 RGMBQ6NW40 437 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 EPHX4Q8IUS5 362 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 TOP6BLQ8N6T0 577 aa12.45□□□□□ -0.42
COMMD4-209ENST00000564068 UXS1Q8NBZ7 420 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms