RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 BCL7AQ4VC05 210 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 CACHD1Q5VU97 1274 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 CYB5D1Q6P9G0 228 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 C6orf15Q6UXA7 325 aaPredicted RBP16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 PRICKLE2Q7Z3G6 844 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 BPHLQ86WA6 291 aaPredicted RBP16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 UNC5BQ8IZJ1 945 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 BEND7Q8N7W2 519 aaPredicted RBP16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 GPR150Q8NGU9 434 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 FCRL4Q96PJ5 515 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 OR6C1Q96RD1 312 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 ULBP3Q9BZM4 244 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 CLMPQ9H6B4 373 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 C10orf88Q9H8K7 445 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 ACSL5Q9ULC5 683 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 REXO2Q9Y3B8 237 aaKnown RBP16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 RPS6KL1Q9Y6S9 549 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 BSNQ9UPA5 3926 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 MYO18BQ8IUG5 2567 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 SOWAHDA6NJG2 315 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 SGTAO43765 313 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 RASSF9O75901 435 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 RECKO95980 971 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 MTHFD1P11586 935 aaKnown RBP16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 MSH3P20585 1137 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 ZNF75DP51815 510 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 EIF3EP60228 445 aaKnown RBP16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 KCNC4Q03721 635 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 PRPSAP1Q14558 356 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 FNBP1LQ5T0N5 605 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 CCDC181Q5TID7 509 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 DENND5AQ6IQ26 1287 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 KMT5CQ86Y97 462 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 LRRC57Q8N9N7 239 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 OR4K2Q8NGD2 314 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 OR2L2Q8NH16 312 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 STARD8Q92502 1023 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 SPATA13Q96N96 652 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 CD180Q99467 661 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 FEZ2Q9UHY8 353 aaPredicted RBP16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 DUSP10Q9Y6W6 482 aa16.84■□□□□ 0.29
VPS9D1-203ENST00000563798 SPAG6O75602 509 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 STK10O94804 968 aaKnown RBP16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 TJP3O95049 919 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 IPO7O95373 1038 aaKnown RBP16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 CRTAMO95727 393 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 PSMB4P28070 264 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 OAS2P29728 719 aaKnown RBP16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 CETN2P41208 172 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 IRGCQ6NXR0 463 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 FAM92BQ6ZTR7 304 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 CARFQ8N187 725 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 ALG3Q92685 438 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 INSM2Q96T92 566 aaPredicted RBP16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 LACRTQ9GZZ8 138 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 ASB8Q9H765 288 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 FKBPLQ9UIM3 349 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 PSMD13Q9UNM6 376 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 KCTD3Q9Y597 815 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 PCDHGA6Q9Y5G7 932 aa16.83■□□□□ 0.28
VPS9D1-203ENST00000563798 IGHV5-51A0A0C4DH38 117 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 C17orf113A0A1B0GUU1 675 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 OR5K3A6NET4 321 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 KCNN4O15554 427 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 MT-ND3P03897 115 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 TCN2P20062 427 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 F8A1P23610 371 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 AKT1P31749 480 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 ZNF140P52738 457 aaPredicted RBP16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 PPP1CAP62136 330 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 NFKB2Q00653 900 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 CAPRIN2Q6IMN6 1127 aaKnown RBP16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 DARS2Q6PI48 645 aaKnown RBP16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 RAD9BQ6WBX8 426 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 PPP1R3BQ86XI6 285 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 GALNT6Q8NCL4 622 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 HEXDCQ8WVB3 486 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 APOBEC4Q8WW27 367 aaKnown RBP16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 ULK4Q96C45 1275 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 KIR3DX1Q9H7L2 352 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 PDE7BQ9NP56 450 aa16.82■□□□□ 0.28
VPS9D1-203ENST00000563798 UBR5O95071 2799 aaPredicted RBP16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 TLCD2A6NGC4 264 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 KIAA0754O94854 1291 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 DLSTP36957 453 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 HADHAP40939 763 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 PRLHRP49683 370 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 VAV2P52735 878 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 ACY1Q03154 408 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 OLIG2Q13516 323 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 GPR33Q49SQ1 333 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 KCTD11Q693B1 232 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 SNX20Q7Z614 316 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 RASGRP3Q8IV61 690 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 NXPE1Q8N323 547 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 OR13C4Q8NGS5 318 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 CCDC110Q8TBZ0 833 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 STAMBPL1Q96FJ0 436 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 TBL1YQ9BQ87 522 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 APOL2Q9BQE5 337 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms