RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 PMF1Q6P1K2 205 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 CHST15Q7LFX5 561 aaPredicted RBP10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 ZSWIM9Q86XI8 627 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 TRIM48Q8IWZ4 208 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 FAM20CQ8IXL6 584 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 KBTBD2Q8IY47 623 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 UBA3Q8TBC4 463 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 CCDC110Q8TBZ0 833 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 SMPDL3BQ92485 455 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 DNAJC19Q96DA6 116 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 VPS50Q96JG6 964 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 AGAP2Q99490 1192 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 SH3GL2Q99962 352 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 YIPF4Q9BSR8 244 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 SUV39H2Q9H5I1 410 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 SLC40A1Q9NP59 571 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 TAS2R14Q9NYV8 317 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 SCHIP1Q9P0W5 487 aaPredicted RBP10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 ZNF212Q9UDV6 495 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 GNPTGQ9UJJ9 305 aa10.25□□□□□ -0.77
HDGFL3-204ENST00000563790 FREM3P0C091 2139 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 A0A0G2JNJ9 132 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 UBA6A0AVT1 1052 aaPredicted RBP10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 TMEM150CB9EJG8 249 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 RASGRF2O14827 1237 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 TCF21O43680 179 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 IGSF6O95976 241 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 HPP00738 406 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 HLA-DRAP01903 254 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 PTGER1P34995 402 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 HOXD13P35453 343 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 UBA7P41226 1012 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 GNA12Q03113 381 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 EMC4Q5J8M3 183 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 DPPA4Q7L190 304 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 SLC13A5Q86YT5 568 aaPredicted RBP10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 TTC30BQ8N4P2 665 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 TTC39CQ8N584 583 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 SIRT6Q8N6T7 355 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 OR10Q1Q8NGQ4 319 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 FNIP1Q8TF40 1166 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 SLC35F5Q8WV83 523 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 SNX21Q969T3 373 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 C1orf159Q96HA4 380 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 AK8Q96MA6 479 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 ZNF396Q96N95 335 aaPredicted RBP10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 TRIM62Q9BVG3 475 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 TLR10Q9BXR5 811 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 AP1M1Q9BXS5 423 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 RMI1Q9H9A7 625 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 MRM3Q9HC36 420 aaKnown RBP10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 AGPAT3Q9NRZ7 376 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 Q9UFV3 132 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 HERC2O95714 4834 aa10.24□□□□□ -0.77
HDGFL3-204ENST00000563790 VEGFDO43915 354 aa10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 PAGE1O75459 146 aa10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 PRR35P0CG20 571 aa10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 ETFBP38117 255 aa10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 PIK3CAP42336 1068 aa10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 CYP2J2P51589 502 aa10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 DCDP81605 110 aaKnown RBP10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 RAET1GQ6H3X3 334 aa10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 FBXO38Q6PIJ6 1188 aa10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 WDR53Q7Z5U6 358 aaPredicted RBP10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 RBM12BQ8IXT5 1001 aaKnown RBP10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 CARFQ8N187 725 aa10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 RFLNBQ8N5W9 214 aa10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 RNASE6Q93091 150 aaKnown RBP10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 ZSCAN31Q96LW9 406 aaPredicted RBP10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 C12orf65Q9H3J6 166 aaKnown RBP10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 SAMSN1Q9NSI8 373 aaKnown RBP10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 POT1Q9NUX5 634 aa10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 SOHLH2Q9NX45 425 aa10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 MPP6Q9NZW5 540 aa10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 ALG6Q9Y672 507 aa10.23□□□□□ -0.77
HDGFL3-204ENST00000563790 A0A1B0GTH9 108 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 E7EQ34 232 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 INSIG1O15503 277 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 SART1O43290 800 aaKnown RBP10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 ACP5P13686 325 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 ITGA2P17301 1181 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 CCNFP41002 786 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 PAK1Q13153 545 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 VEZF1Q14119 521 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 GRM3Q14832 879 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 SLC9A5Q14940 896 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 RHBDD2Q6NTF9 364 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 STRADAQ7RTN6 431 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 ARHGAP12Q8IWW6 846 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 SMYD4Q8IYR2 804 aaPredicted RBP10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 FAM184AQ8NB25 1140 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 OR5M3Q8NGP4 307 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 PROKR1Q8TCW9 393 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 ZFPM2Q8WW38 1151 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 DTD2Q96FN9 168 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 IMPG2Q9BZV3 1241 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 MIS12Q9H081 205 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 SIK2Q9H0K1 926 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 ZNF160Q9HCG1 818 aa10.22□□□□□ -0.77
HDGFL3-204ENST00000563790 CISHQ9NSE2 258 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms