RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 STON2Q8WXE9 905 aa9.57□□□□□ -0.88
UBFD1-202ENST00000563366 GTPBP3Q969Y2 492 aaKnown RBP9.57□□□□□ -0.88
UBFD1-202ENST00000563366 ARRDC3Q96B67 414 aa9.57□□□□□ -0.88
UBFD1-202ENST00000563366 NUS1Q96E22 293 aa9.57□□□□□ -0.88
UBFD1-202ENST00000563366 CNDP1Q96KN2 507 aa9.57□□□□□ -0.88
UBFD1-202ENST00000563366 COQ10AQ96MF6 247 aa9.57□□□□□ -0.88
UBFD1-202ENST00000563366 LRRC37BQ96QE4 947 aa9.57□□□□□ -0.88
UBFD1-202ENST00000563366 GABRG3Q99928 467 aa9.57□□□□□ -0.88
UBFD1-202ENST00000563366 RPP25Q9BUL9 199 aaKnown RBP9.57□□□□□ -0.88
UBFD1-202ENST00000563366 ILKAPQ9H0C8 392 aaPredicted RBP9.57□□□□□ -0.88
UBFD1-202ENST00000563366 MTG2Q9H4K7 406 aa9.57□□□□□ -0.88
UBFD1-202ENST00000563366 ALG9Q9H6U8 611 aa9.57□□□□□ -0.88
UBFD1-202ENST00000563366 KCNK12Q9HB15 430 aa9.57□□□□□ -0.88
UBFD1-202ENST00000563366 C11orf16Q9NQ32 467 aa9.57□□□□□ -0.88
UBFD1-202ENST00000563366 SARDHQ9UL12 918 aa9.57□□□□□ -0.88
UBFD1-202ENST00000563366 MED16Q9Y2X0 877 aa9.57□□□□□ -0.88
UBFD1-202ENST00000563366 RAP2CQ9Y3L5 183 aa9.57□□□□□ -0.88
UBFD1-202ENST00000563366 A0A0G2JND7 137 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 A0A0U1RQS6 177 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 CDC14CA4D256 554 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 PABPN1LA6NDY0 278 aaKnown RBP9.56□□□□□ -0.88
UBFD1-202ENST00000563366 A8MT66 165 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 C2CD4DB7Z1M9 353 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 K7EQS6 105 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 BTN3A1O00481 513 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 ZBTB14O43829 449 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 DLX3O60479 287 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 DNAJC6O75061 913 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 DNTTP04053 509 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 S100BP04271 92 aaPredicted RBP9.56□□□□□ -0.88
UBFD1-202ENST00000563366 SBK3P0C264 359 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 ZNF16P17020 682 aaPredicted RBP9.56□□□□□ -0.88
UBFD1-202ENST00000563366 UGT1A6P19224 532 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 MSH3P20585 1137 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 IMPDH1P20839 514 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 UGT1A1P22309 533 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 UGT1A4P22310 534 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 UGT1A3P35503 534 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 UGT1A5P35504 534 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 ETV3P41162 512 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 P2RY2P41231 377 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 CCR3P51677 355 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 NAGLUP54802 743 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 HERVK_113P63132 956 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 TIAL1Q01085 375 aaKnown RBP eCLIP9.56□□□□□ -0.88
UBFD1-202ENST00000563366 SATB1Q01826 763 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 IFT88Q13099 833 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 TTC31Q49AM3 519 aaPredicted RBP9.56□□□□□ -0.88
UBFD1-202ENST00000563366 FOXR1Q6PIV2 292 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 TMEM207Q6UWW9 146 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 FRA10AC1Q70Z53 315 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 KBTBD6Q86V97 674 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 ZBTB2Q8N680 514 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 SIDT2Q8NBJ9 832 aaKnown RBP9.56□□□□□ -0.88
UBFD1-202ENST00000563366 ST13P5Q8NFI4 369 aaPredicted RBP9.56□□□□□ -0.88
UBFD1-202ENST00000563366 OR2T3Q8NH03 318 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 BTN2A2Q8WVV5 523 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 C10orf82Q8WW14 230 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 GLYATL1Q969I3 302 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 L3HYPDHQ96EM0 354 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 LINGO1Q96FE5 620 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 FAR2Q96K12 515 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 ZNF514Q96K75 400 aaPredicted RBP9.56□□□□□ -0.88
UBFD1-202ENST00000563366 ATOH8Q96SQ7 321 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 GATA5Q9BWX5 397 aaPredicted RBP9.56□□□□□ -0.88
UBFD1-202ENST00000563366 ERVK-6Q9BXR3 956 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 FAM126AQ9BYI3 521 aaPredicted RBP9.56□□□□□ -0.88
UBFD1-202ENST00000563366 EPHX3Q9H6B9 360 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 SARS2Q9NP81 518 aaKnown RBP9.56□□□□□ -0.88
UBFD1-202ENST00000563366 MRGBPQ9NV56 204 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 VTI1BQ9UEU0 232 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 HAO1Q9UJM8 370 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 APOBEC2Q9Y235 224 aaKnown RBP9.56□□□□□ -0.88
UBFD1-202ENST00000563366 STK38LQ9Y2H1 464 aa9.56□□□□□ -0.88
UBFD1-202ENST00000563366 CCT8L1PA6NM43 557 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 SUPT3HB4E1H0 165 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 STX16-NPEPL1H3BU86 382 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 MAN2B1O00754 1011 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 STX16O14662 325 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 RAD51BO15315 384 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 GPR39O43194 453 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 SNX2O60749 519 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 HNRNPCL1O60812 293 aaKnown RBP9.55□□□□□ -0.88
UBFD1-202ENST00000563366 SUPT3HO75486 399 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 SLC25A14O95258 325 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-202ENST00000563366 TRIM16O95361 564 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 ENO2P09104 434 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-202ENST00000563366 C6P13671 934 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 GFAPP14136 432 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 HOXB2P14652 356 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 ALOX15P16050 662 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-202ENST00000563366 GMPRP36959 345 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 SOX9P48436 509 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 RPL14P50914 215 aaKnown RBP9.55□□□□□ -0.88
UBFD1-202ENST00000563366 SEMG2Q02383 582 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 OVGP1Q12889 678 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 SP140Q13342 867 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 SMAD2Q15796 467 aaKnown RBP9.55□□□□□ -0.88
UBFD1-202ENST00000563366 TBCCQ15814 346 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 POM121L1PQ3SYA9 428 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms