RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ATXN7L1Q9ULK2 861 aaPredicted RBP8.38□□□□□ -1.07
UBR1-204ENST00000563239 ENTPD2Q9Y5L3 495 aa8.38□□□□□ -1.07
UBR1-204ENST00000563239 ASH1LQ9NR48 2969 aaKnown RBP8.38□□□□□ -1.07
UBR1-204ENST00000563239 C17orf113A0A1B0GUU1 675 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 MAGEB16A2A368 324 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 PMS2P1A4D2B8 440 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 OR5K4A6NMS3 321 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 RHPN2P1A8MT19 583 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 PDZK1P1A8MUH7 402 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 D6RAR5 112 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 CFAP99D6REC4 459 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 RAD51CO43502 376 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 AP2A2O94973 939 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 SEC31AO94979 1220 aaKnown RBP8.37□□□□□ -1.07
UBR1-204ENST00000563239 VAPBO95292 243 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 F7P08709 466 aaPredicted RBP8.37□□□□□ -1.07
UBR1-204ENST00000563239 RALBP11234 206 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 VCLP18206 1134 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 ALDH4A1P30038 563 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 PBLDP30039 288 aaPredicted RBP8.37□□□□□ -1.07
UBR1-204ENST00000563239 CSF2RBP32927 897 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 NSG1P42857 185 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 RPL21P46778 160 aaKnown RBP8.37□□□□□ -1.07
UBR1-204ENST00000563239 PRAMEP78395 509 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 HHEXQ03014 270 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 ZFP36L1Q07352 338 aaKnown RBP8.37□□□□□ -1.07
UBR1-204ENST00000563239 DHX9Q08211 1270 aaKnown RBP8.37□□□□□ -1.07
UBR1-204ENST00000563239 CBLBQ13191 982 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 SPIDRQ14159 915 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 MORF4L2Q15014 288 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 RPE65Q16518 533 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 FASTKD1Q53R41 847 aaKnown RBP8.37□□□□□ -1.07
UBR1-204ENST00000563239 LYPLAL1Q5VWZ2 237 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 KIAA0930Q6ICG6 404 aaPredicted RBP8.37□□□□□ -1.07
UBR1-204ENST00000563239 CAPRIN2Q6IMN6 1127 aaKnown RBP8.37□□□□□ -1.07
UBR1-204ENST00000563239 UNQ6494/PRO21346Q6UXR6 183 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 CERS6Q6ZMG9 384 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 RBM44Q6ZP01 1051 aaKnown RBP8.37□□□□□ -1.07
UBR1-204ENST00000563239 USP53Q70EK8 1073 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 SLC9B2Q86UD5 537 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 SLITRK4Q8IW52 837 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 CFAP206Q8IYR0 622 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 GPR150Q8NGU9 434 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 WDR48Q8TAF3 677 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 HM13Q8TCT9 377 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 LKAAEAR1Q8TD35 194 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 ATXN7L3BQ96GX2 97 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 PRR11Q96HE9 360 aaPredicted RBP8.37□□□□□ -1.07
UBR1-204ENST00000563239 RMDN2Q96LZ7 410 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 DEPDC7Q96QD5 511 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 GFM1Q96RP9 751 aaKnown RBP8.37□□□□□ -1.07
UBR1-204ENST00000563239 INSM2Q96T92 566 aaPredicted RBP8.37□□□□□ -1.07
UBR1-204ENST00000563239 NUDT22Q9BRQ3 303 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 CCM2Q9BSQ5 444 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 TBC1D10AQ9BXI6 508 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 WWP1Q9H0M0 922 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 P2RY12Q9H244 342 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 OR52A5Q9H2C5 316 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 COG4Q9H9E3 785 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 UCK1Q9HA47 277 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 SLC40A1Q9NP59 571 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 CATSPERZQ9NTU4 200 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 IL1RAPL1Q9NZN1 696 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 OGFRQ9NZT2 677 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 CDC23Q9UJX2 597 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 PSMD13Q9UNM6 376 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 SNX24Q9Y343 169 aa8.37□□□□□ -1.07
UBR1-204ENST00000563239 CELSR3Q9NYQ7 3312 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 SLC5A10A0PJK1 596 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 KLHL33A6NCF5 533 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 FAM187AA6NFU0 413 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 BHMG1C9JSJ3 638 aaPredicted RBP8.36□□□□□ -1.07
UBR1-204ENST00000563239 TAF4O00268 1085 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 USP1O94782 785 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 POLBP06746 335 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 SLC2A4P14672 509 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 PDHA2P29803 388 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 PREPP48147 710 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 ITGA8P53708 1063 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 RTP5Q14D33 572 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 TRADDQ15628 312 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 TYSND1Q2T9J0 566 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 AMZ1Q400G9 498 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 ZNF789Q5FWF6 425 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 DUPD1Q68J44 220 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 DUS1LQ6P1R4 473 aaKnown RBP8.36□□□□□ -1.07
UBR1-204ENST00000563239 CASC4Q6P4E1 433 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 NAPRTQ6XQN6 538 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 TMEM26Q6ZUK4 368 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 CENPUQ71F23 418 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 PCGF5Q86SE9 256 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 UNC5BQ8IZJ1 945 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 LPGAT1Q92604 370 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 ZNF669Q96BR6 464 aaPredicted RBP8.36□□□□□ -1.07
UBR1-204ENST00000563239 STAMBPL1Q96FJ0 436 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 SNF8Q96H20 258 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 BIRC8Q96P09 236 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 SLC38A3Q99624 504 aa8.36□□□□□ -1.07
UBR1-204ENST00000563239 EBNA1BP2Q99848 306 aaKnown RBP8.36□□□□□ -1.07
UBR1-204ENST00000563239 ERP44Q9BS26 406 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms