RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PIPSLA2A3N6 862 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 MKRN2OSH3BPM6 223 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 MTSS1O43312 755 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 MTHFD1P11586 935 aaKnown RBP16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 PBLDP30039 288 aaPredicted RBP16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 MARCKSL1P49006 195 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 PMS2P54278 862 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 MPP3Q13368 585 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ITGA9Q13797 1035 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 PLCL1Q15111 1095 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TFDP3Q5H9I0 405 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 FNBP1LQ5T0N5 605 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 METRNLQ641Q3 311 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TCTN3Q6NUS6 607 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 DUS1LQ6P1R4 473 aaKnown RBP16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 CYB5D1Q6P9G0 228 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 DET1Q7L5Y6 550 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 VAT1Q99536 393 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TWSG1Q9GZX9 223 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ACTL8Q9H568 366 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 IMP3Q9NV31 184 aaKnown RBP16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TLK1Q9UKI8 766 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ALG6Q9Y672 507 aa16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 DNMT3AQ9Y6K1 912 aaPredicted RBP16.32■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 OR5K3A6NET4 321 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 C21orf140B9A014 251 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 RFPL1O75677 317 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 DNAJB5O75953 348 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 PRAMEF1O95521 474 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 RECKO95980 971 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 PDGFAP04085 211 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 NTRK1P04629 796 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TPM1P09493 284 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TNNT3P45378 269 aaPredicted RBP16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 HADHBP55084 474 aaKnown RBP16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 RPS18P62269 152 aaKnown RBP16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 DNTTIP2Q5QJE6 756 aaKnown RBP16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 FAM199XQ6PEV8 388 aaPredicted RBP16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 KLHL35Q6PF15 583 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 KATNAL2Q8IYT4 538 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 MIB2Q96AX9 1013 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ZNF514Q96K75 400 aaPredicted RBP16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 FCRL4Q96PJ5 515 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 INSM2Q96T92 566 aaPredicted RBP16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 FSD1LQ9BXM9 530 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TRIM55Q9BYV6 548 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 WWP1Q9H0M0 922 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 C10orf88Q9H8K7 445 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 FGF21Q9NSA1 209 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 RSPH14Q9UHP6 348 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ARL5AQ9Y689 179 aa16.31■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TLCD2A6NGC4 264 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 SGTAO43765 313 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 AGTP01019 485 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 MSH3P20585 1137 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 AKT1P31749 480 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ACY1Q03154 408 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 XRCC4Q13426 336 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 LAMB3Q13751 1172 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 LONRF2Q1L5Z9 754 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ASB18Q6ZVZ8 466 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 BPHLQ86WA6 291 aaPredicted RBP16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 KMT5CQ86Y97 462 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 APLFQ8IW19 511 aaPredicted RBP16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 D2HGDHQ8N465 521 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 SPDYE1Q8NFV5 336 aaPredicted RBP16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ZNF398Q8TD17 642 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 CD180Q99467 661 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ANP32EQ9BTT0 268 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 HRASLS2Q9NWW9 162 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 MAN2B2Q9Y2E5 1009 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 NAV2Q8IVL1 2488 aa16.3■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 UBA6A0AVT1 1052 aaPredicted RBP16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 MGAT4DA6NG13 374 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 HACD1B0YJ81 288 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 STX7O15400 261 aaKnown RBP16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 ZRANB2O95218 330 aaKnown RBP eCLIP16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 RBL1P28749 1068 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 CD97P48960 835 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 MLLT10P55197 1068 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 HSD11B2P80365 405 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TBX2Q13207 712 aaPredicted RBP16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 OLIG2Q13516 323 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 SEMA5AQ13591 1074 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 GPR19Q15760 415 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 OOSP2Q86WS3 158 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 CCDC50Q8IVM0 306 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 RCOR2Q8IZ40 523 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TEX19Q8NA77 164 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 OR2L2Q8NH16 312 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 KRT35Q92764 455 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 C12orf66Q96MD2 445 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 PPM1MQ96MI6 270 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 FICDQ9BVA6 458 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 GPR87Q9BY21 358 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 GBA3Q9H227 469 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 FAM8A1Q9UBU6 413 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 SLC24A2Q9UI40 661 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TRHDEQ9UKU6 1024 aa16.29■□□□□ 0.2
VPS9D1-AS1-201ENST00000562298 TFR2Q9UP52 801 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms