RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ERVK-8P63133 956 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 ADGRE1Q14246 886 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 PHKG1Q16816 387 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 ATP13A5Q4VNC0 1218 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 PDCD4Q53EL6 469 aaKnown RBP9.66□□□□□ -0.86
SMG1-205ENST00000561947 COQ5Q5HYK3 327 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 PRMT9Q6P2P2 845 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 BLOC1S3Q6QNY0 202 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 KIAA0907Q7Z7F0 614 aaPredicted RBP9.66□□□□□ -0.86
SMG1-205ENST00000561947 SPATA24Q86W54 205 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 ADGRG2Q8IZP9 1017 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 PLCD3Q8N3E9 789 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 OR2A12Q8NGT7 310 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 MICAL1Q8TDZ2 1067 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 TSPEARQ8WU66 669 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 PPP2R3CQ969Q6 453 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 HOPXQ9BPY8 73 aaPredicted RBP9.66□□□□□ -0.86
SMG1-205ENST00000561947 APOL5Q9BWW9 433 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 BRINP2Q9C0B6 783 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 SLC52A3Q9NQ40 469 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 MARK1Q9P0L2 795 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 KLHL42Q9P2K6 505 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 RIMS3Q9UJD0 308 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 ERVW-1Q9UQF0 538 aa9.66□□□□□ -0.86
SMG1-205ENST00000561947 IGLV3-16A0A075B6K0 115 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 PRSS51A0A1B0GVH4 220 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 C9JVG2 144 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 XYLBO75191 536 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 OTCP00480 354 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 C8BP07358 591 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 CAPN1P07384 714 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 HNRNPA1P09651 372 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMG1-205ENST00000561947 CBSLP0DN79 551 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 TCF3P15923 654 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 VCLP18206 1134 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 CBSP35520 551 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 IRS1P35568 1242 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 ARL1P40616 181 aaPredicted RBP9.65□□□□□ -0.86
SMG1-205ENST00000561947 RECQLP46063 649 aaPredicted RBP9.65□□□□□ -0.86
SMG1-205ENST00000561947 SPINT3P49223 89 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 POLR2LP62875 67 aaKnown RBP9.65□□□□□ -0.86
SMG1-205ENST00000561947 B4GALNT1Q00973 533 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 UBE3AQ05086 875 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 TRAF3Q13114 568 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 LRRC73Q5JTD7 316 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 TMEM215Q68D42 235 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 SULT1C3Q6IMI6 304 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 PSRC1Q6PGN9 363 aaPredicted RBP9.65□□□□□ -0.86
SMG1-205ENST00000561947 TMEM126BQ8IUX1 230 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 AHI1Q8N157 1196 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 CHCHD4Q8N4Q1 142 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 OR4F6Q8NGB9 312 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 METTL6Q8TCB7 284 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 UBTD2Q8WUN7 234 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 ATP6V1E2Q96A05 226 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 OTUB2Q96DC9 234 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 ZSWIM3Q96MP5 696 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 EGFL8Q99944 293 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 SLC39A3Q9BRY0 314 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 TMEM79Q9BSE2 394 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 PCDHAC1Q9H158 963 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 EBF3Q9H4W6 596 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 WWOXQ9NZC7 414 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 PRKAG2Q9UGJ0 569 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 WNT6Q9Y6F9 365 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 PLXNA2O75051 1894 aa9.65□□□□□ -0.86
SMG1-205ENST00000561947 SMNDC1O75940 238 aaKnown RBP eCLIP9.65□□□□□ -0.87
SMG1-205ENST00000561947 POLR2EP19388 210 aaKnown RBP9.65□□□□□ -0.87
SMG1-205ENST00000561947 HTR6P50406 440 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 AQP4P55087 323 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 RCAN2Q14206 197 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 ATP6AP1LQ52LC2 224 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 C6orf136Q5SQH8 315 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 BRAT1Q6PJG6 821 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 Q6ZSR9 355 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 MINDY1Q8N5J2 469 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 MYLIPQ8WY64 445 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 RHBDF1Q96CC6 855 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 SPDL1Q96EA4 605 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 LRCH3Q96II8 777 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 LRGUKQ96M69 825 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 NR1H4Q96RI1 486 aaPredicted RBP9.65□□□□□ -0.87
SMG1-205ENST00000561947 SLC2A11Q9BYW1 496 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 YY1AP1Q9H869 796 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 IPPKQ9H8X2 491 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 RDH14Q9HBH5 336 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 GID8Q9NWU2 228 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 PKD2L2Q9NZM6 624 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 ABCD2Q9UBJ2 740 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 RWDD3Q9Y3V2 267 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 DTNAQ9Y4J8 743 aa9.65□□□□□ -0.87
SMG1-205ENST00000561947 NUP210Q8TEM1 1887 aaPredicted RBP9.65□□□□□ -0.87
SMG1-205ENST00000561947 A0A1W2PP18 115 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 FXYD1O00168 92 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 SYNCRIPO60506 623 aaKnown RBP9.64□□□□□ -0.87
SMG1-205ENST00000561947 CYP2A6P11509 494 aaPredicted RBP9.64□□□□□ -0.87
SMG1-205ENST00000561947 ZFP36L2P47974 494 aaKnown RBP9.64□□□□□ -0.87
SMG1-205ENST00000561947 KCNK10P57789 538 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 FOXM1Q08050 763 aa9.64□□□□□ -0.87
SMG1-205ENST00000561947 ARHGEF7Q14155 803 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms