RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 BDH2Q9BUT1 245 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 CRISPLD1Q9H336 500 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 TRIT1Q9H3H1 467 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 TLR8Q9NR97 1041 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 TBC1D14Q9P2M4 693 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 ANAPC2Q9UJX6 822 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 FAM95CA0A1B0GW59 222 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 SLC12A8A0AV02 714 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 DRGXA6NNA5 263 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 A8MU76 341 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 ARPC2O15144 300 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 HOXC11O43248 304 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 TBC1D4O60343 1298 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 DLX3O60479 287 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 UPK1BO75841 260 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 INHAP05111 366 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 KRT8P05787 483 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 MMP2P08253 660 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 CPB1P15086 417 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 EIF2DP41214 584 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 CD86P42081 329 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 GNG2P59768 71 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 RAB10P61026 200 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 GPR17Q13304 367 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 COQ5Q5HYK3 327 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 TTC23Q5W5X9 447 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 RNF19BQ6ZMZ0 732 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 R3HCC1LQ7Z5L2 792 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 CEP97Q8IW35 865 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 DBF4BQ8NFT6 615 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 PSMG2Q969U7 264 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 ELMO2Q96JJ3 720 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 RNF38Q9H0F5 515 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 SP110Q9HB58 689 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 PCDH12Q9NPG4 1184 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 RUVBL2Q9Y230 463 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 ACOT9Q9Y305 439 aa13.8□□□□□ -0.2
RABGGTA-220ENST00000560998 MAN1A2O60476 641 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 TPST1O60507 370 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 HMBSP08397 361 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 CDH1P12830 882 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 NR4A2P43354 598 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 SERPINH1P50454 418 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 ALDH3A2P51648 485 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 MAXP61244 160 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 DSC2Q02487 901 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 GALNT1Q10472 559 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 IHHQ14623 411 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 ZNF470Q6ECI4 717 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 BPHLQ86WA6 291 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 LGI2Q8N0V4 545 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 CLIP4Q8N3C7 705 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 SVOPQ8N4V2 548 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 ASCC1Q8N9N2 400 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 SPERTQ8NA61 448 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 SIMC1Q8NDZ2 872 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 RHOXF1Q8NHV9 184 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 TRIM63Q969Q1 353 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 PABPC5Q96DU9 382 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 CCDC126Q96EE4 140 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 AURKBQ96GD4 344 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 DACH2Q96NX9 599 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 GPR78Q96P69 363 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 SEPT5Q99719 369 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 CCDC177Q9NQR7 707 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 COMMD8Q9NX08 183 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 GTSE1Q9NYZ3 720 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 HCSTQ9UBK5 93 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 FBXO5Q9UKT4 447 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 PRELID1Q9Y255 219 aa13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 TMA7Q9Y2S6 64 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-220ENST00000560998 TAF4O00268 1085 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 NDUFS2O75306 463 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 NADKO95544 446 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 STMN1P16949 149 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 OXTRP30559 389 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 GLRBP48167 497 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 ALDH7A1P49419 539 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 COPZ1P61923 177 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 RING1Q06587 406 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 ITKQ08881 620 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 VAC14Q08AM6 782 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 ZNF460Q14592 562 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 ACOX1Q15067 660 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 CYP51A1Q16850 503 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 TSTD2Q5T7W7 516 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 FUT10Q6P4F1 479 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 LAYNQ6UX15 382 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 TMC5Q6UXY8 1006 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 FKBP9P1Q75LS8 142 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 CIR1Q86X95 450 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 PTRH1Q86Y79 214 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 FSTL5Q8N475 847 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 CCNYL1Q8N7R7 359 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 OR13J1Q8NGT2 312 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 TADA1Q96BN2 335 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 PAK1IP1Q9NWT1 392 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 PDE10AQ9Y233 779 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 PCDHGB1Q9Y5G3 927 aa13.78□□□□□ -0.2
RABGGTA-220ENST00000560998 TCRBV5S2A0A599 114 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms