RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 MSH3P20585 1137 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 AGTR2P50052 363 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 DPTQ07507 201 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 CDC16Q13042 620 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 RIPK1Q13546 671 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 KHDC1Q4VXA5 237 aaKnown RBP12.7□□□□□ -0.38
SNX1-211ENST00000560829 CLEC6AQ6EIG7 209 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 MMAAQ8IVH4 418 aaKnown RBP12.7□□□□□ -0.38
SNX1-211ENST00000560829 OR56A4Q8NGH8 313 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 UBTD2Q8WUN7 234 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 PPP1R36Q96LQ0 422 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 WRAP53Q9BUR4 548 aaKnown RBP12.7□□□□□ -0.38
SNX1-211ENST00000560829 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.7□□□□□ -0.38
SNX1-211ENST00000560829 DNAJC15Q9Y5T4 150 aa12.7□□□□□ -0.38
SNX1-211ENST00000560829 B2RBV5 119 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 RECQL5O94762 991 aaPredicted RBP12.69□□□□□ -0.38
SNX1-211ENST00000560829 SOD1P00441 154 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 FTH1P02794 183 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 S100BP04271 92 aaPredicted RBP12.69□□□□□ -0.38
SNX1-211ENST00000560829 ENO2P09104 434 aaPredicted RBP12.69□□□□□ -0.38
SNX1-211ENST00000560829 VCLP18206 1134 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 P2RY2P41231 377 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 CAMK2GQ13555 558 aaPredicted RBP12.69□□□□□ -0.38
SNX1-211ENST00000560829 NEK10Q6ZWH5 1172 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 LONP2Q86WA8 852 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 PHYKPLQ8IUZ5 450 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 RASGRP3Q8IV61 690 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 RBM15BQ8NDT2 890 aaKnown RBP12.69□□□□□ -0.38
SNX1-211ENST00000560829 DLG3Q92796 817 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 ZNF382Q96SR6 550 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 HGH1Q9BTY7 390 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 NUSAP1Q9BXS6 441 aaKnown RBP12.69□□□□□ -0.38
SNX1-211ENST00000560829 RSPH9Q9H1X1 276 aaPredicted RBP12.69□□□□□ -0.38
SNX1-211ENST00000560829 MMADHCQ9H3L0 296 aaPredicted RBP12.69□□□□□ -0.38
SNX1-211ENST00000560829 EPHX3Q9H6B9 360 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 SEMA4BQ9NPR2 832 aaPredicted RBP12.69□□□□□ -0.38
SNX1-211ENST00000560829 KLC4Q9NSK0 619 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 UTP6Q9NYH9 597 aaKnown RBP12.69□□□□□ -0.38
SNX1-211ENST00000560829 EIF2B4Q9UI10 523 aaKnown RBP12.69□□□□□ -0.38
SNX1-211ENST00000560829 ASB1Q9Y576 335 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 FADS3Q9Y5Q0 445 aa12.69□□□□□ -0.38
SNX1-211ENST00000560829 MTX2O75431 263 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 GPC4O75487 556 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 C8GP07360 202 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 C6P13671 934 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 KIR2DL1P43626 348 aaPredicted RBP12.68□□□□□ -0.38
SNX1-211ENST00000560829 CPA2P48052 419 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 GALK1P51570 392 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 COPAP53621 1224 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 PKNOX1P55347 436 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 CDKL1Q00532 357 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 PHKG1Q16816 387 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 DNAL1Q4LDG9 190 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 PIP5KL1Q5T9C9 394 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 NXNQ6DKJ4 435 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 SULT1C3Q6IMI6 304 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 LARP4Q71RC2 724 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNX1-211ENST00000560829 DET1Q7L5Y6 550 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 EFL1Q7Z2Z2 1120 aaKnown RBP12.68□□□□□ -0.38
SNX1-211ENST00000560829 CHCHD4Q8N4Q1 142 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 NUS1Q96E22 293 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 C19orf60Q96EN9 201 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 P2RY13Q9BPV8 354 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 ZNF225Q9UK10 706 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 CNOT6Q9ULM6 557 aaKnown RBP12.68□□□□□ -0.38
SNX1-211ENST00000560829 STK38LQ9Y2H1 464 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 FIS1Q9Y3D6 152 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 REV3LO60673 3130 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 DOCK8Q8NF50 2099 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 SPTBN5Q9NRC6 3674 aaKnown RBP12.68□□□□□ -0.38
SNX1-211ENST00000560829 PLXNA2O75051 1894 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 A0A1B0GTL3 188 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 K7EQS6 105 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 SLC16A5O15375 505 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 TAPBPO15533 448 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 AP1G1O43747 822 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 PIK3R1P27986 724 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 DRD3P35462 400 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 CPOXP36551 454 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 SOX9P48436 509 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 PSMD8P48556 350 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 PRLHRP49683 370 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 FOXA1P55317 472 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 CNTN1Q12860 1018 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 TMEM115Q12893 351 aaPredicted RBP12.68□□□□□ -0.38
SNX1-211ENST00000560829 SP140Q13342 867 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 HERC3Q15034 1050 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 FBXO48Q5FWF7 155 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 TMEM198Q66K66 360 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 TTC23LQ6PF05 361 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 SYVN1Q86TM6 617 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 CHPFQ8IZ52 775 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 ZNF513Q8N8E2 541 aaPredicted RBP12.68□□□□□ -0.38
SNX1-211ENST00000560829 RASGEF1AQ8N9B8 481 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 CSGALNACT1Q8TDX6 532 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 TWIST2Q8WVJ9 160 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 ASZ1Q8WWH4 475 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 ASB11Q8WXH4 323 aa12.68□□□□□ -0.38
SNX1-211ENST00000560829 EZH1Q92800 747 aaPredicted RBP12.68□□□□□ -0.38
SNX1-211ENST00000560829 RHBDF1Q96CC6 855 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms